ORI10010013 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_000195855.1`
Acc	`NC_002677.1`
OriID	ORI10010013
Organism	Mycobacterium leprae TN
Topology	Circular
Lineage	Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium leprae
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	3268203 nt
Chromosome GC content	57.80%
Indicator genes	dnaA 1... 1566nt dnaN 2081... 3280nt hemE 1208217... 1209290nt hemB 2893799... 2894788nt rpmH 3267510... 3267653nt
OriC location	1567 ... 2080 nt
OriC Length	514 nt
OriC AT Content	0.5409

Comparative Sequence Support

Recurrence category Multi-accession

Sequence cluster BC-OH001385

Cluster members 5

Distinct accessions 5

Species / genera 2 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank	Ori ID	Accession	Organism	Identity	Reciprocal coverage	Literature linkage
1	`ORI97024466`	`NZ_AP014567.1`	Mycobacterium leprae Kyoto-2	100.00%	100.00%	Not linked
2	`ORI97030558`	`NZ_CP029543.1`	Mycobacterium leprae	100.00%	100.00%	Not linked
3	`ORI97209654`	`NZ_CP083405.1`	Mycobacterium lepromatosis	82.30%	100.00%	Not linked
4	`ORI97283834`	`NZ_CP155806.1`	Mycobacterium lepromatosis	82.30%	100.00%	Not linked
5	`ORI97011763`	`NZ_CP011883.2`	Mycobacterium haemophilum DSM 44634	78.10%	99.60%	Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
58	1566	MADDLSLGFTTVWNAVVSEL...

OriC Visualization

OriC map

OriC sequences

dnaACTTTCGATGCGCAACACATACTTTCTCCAGAAAAACTTCTTGCACTTAAGTCACATCAGTCACATTTCCAAAGTGTGTATATTTCTGTGGACAAACTAAGTATACTGACATGCAACAATCCTTGATTTCATGCACACCCATAGTCGATCCACAACGGCGAATCGCAGATTCTTTATTATCAACACTGACATCCACACCTCAACAGCTCATCTAGCTCAACAAAATCCGGTTATCCACAAGATCCACACCCTTTAATACTGATACTAAGATTTCTTCGTGTTCTTATTTAAAAAATGATGCTGGGGATACAGCATGCCACGATGTGACGGCAACCTCAGCCGTCACCGTTGACGCTACTTTCAAGGTGGCACTCGAAGATCTACGTTTGCTCTTCGACTACTGTTAGGGACGTCGTGGTGCACTATGTGTCACCGACGTTCGTTACAGTGGGCTCACGCTAGCGGGGGCGGAGGCTAGCCGTTGGATTTCAACGATTTTTAGGTGAAGGGGCGCCdnaN

dnaaCTTTCGATGCGCAACACATACTTTCTCCAGAAAAACTTCTTGCACTTAAGTCACATCAGTCACATTTCCAAAGTGTGTATATTTCTGTGGACAAACTAAGTATACTGACATGCAACAATCCTTGATTTCATGCACACCCATAGTCGATCCACAACGGCGAATCGCAGATTCTTTATTATCAACACTGACATCCACACCTCAACAGCTCATCTAGCTCAACAAAATCCGGTTATCCACAAGATCCACACCCTTTAATACTGATACTAAGATTTCTTCGTGTTCTTATTTAAAAAATGATGCTGGGGATACAGCATGCCACGATGTGACGGCAACCTCAGCCGTCACCGTTGACGCTACTTTCAAGGTGGCACTCGAAGATCTACGTTTGCTCTTCGACTACTGTTAGGGACGTCGTGGTGCACTATGTGTCACCGACGTTCGTTACAGTGGGCTCACGCTAGCGGGGGCGGAGGCTAGCCGTTGGATTTCAACGATTTTTAGGTGAAGGGGCGCCdnan

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

Subject ID	Identity (%)	Length	Mismatches	Gaps	Query Start	Query End	Subject Start	Subject End	E-value	Bit Score
ORI92710483	100.00%	514	0	0	1	514	1	514	0.0	950.0
ORI10010013	100.00%	514	0	0	1	514	1	514	0.0	950.0

Found 2 BLAST matches

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