RefSeq | NC_025008 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | pORI00000300 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 4201 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.6329 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 4870..9070 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
GAAAAGGCACTCGAATGAGTGCCTTTTGTGCGTTTTGAGCGTAGCGAAAAAACGGTTCTTTCTTATCTTGATACATATAGAAATAACGTCATTTTTATTTTAGTTGCTGAAAGGTGCGTTGAAGTGTTGGTATGTATGTGTTTTAAAGTATTGAAAACCCTTAAAATTGGTTGCACAGAAAAACCCCATCTGTTAAAGTTATAAGTGACCAAACAAATAACTAAATAGATGGGGGTTTCTTTTAATATTATGTGTCCTAATAGTAGCATTTATTCAGATGAAAAATCAAGGGTTTTAGTGGACAAGACAAAAAGTGGAAAAGTGAGACCATGGAGAGAAAAGAAAATCGCTAATGTTGATTACTTTGAACTTCTGCATATTCTTGAATTTAAAAAGGCTGAAAGAGTAAAAGATTGTGCTGAAATATTAGAGTATAAACAAAATCGTGAAACAGGCGAAAGAAAGTTGTATCGAGTGTTTGAGTCAAGTATTTATAGGCAGTTTTTTTAACACCTTAAATTTGAAAGCGGATTCAAACCTTAGGATACTCTCTTGGTAAGAATTTTGCCTTTTTTAAAAGCCAGACAACTCTTTTAATGCTTTGTAAACTGGTATGTTAGCTTTTCCTTTTAGATATAGAACATTGTCTCTAGTGGCTTCACCAATTGTGCTCGTAACTTTTTCTTTATAGTATCTTGGGGGGTTCTTTTCCACCTTTGTTTCAGTCCATTTTTCGATCCTGCCAAATAGTGTTTTTAAGGTCAATTTATCCAAGTAAGCTACCAAACCAGTGAACATGGCACTTACACCTTTATCCACCCAACTACGGCCATTTTTAAGTCTTTTGGCAAATACACTCATGGTTCCTTCTGCACTACCCATCGGACGCATTCCTGTTGTATCTATACCCTGTTCTTTAAGCCAGTTACGATAATCTCCCAAGGCTTCTGGATATTTCTCTAATTGGCGAATAAATGCTTCTAGACGTTCCTCTTGCTCATCATCCTCTAGCGTTCCGACTGCACTGTTAAGCTCTGTAAGCAATTTCTCATAATCATATGATGCAAGCGCCTTACGAATTGGACGATAACGTGGGTGATGACGGAACAAACTTCGAATCTCCCGTGCCACATGGAAACGATCAAGCGAAAAGAATGCACGATCTTTGAAATAGTCACGACAAGTTGTAATCCAATTTGCACCATCTCCATTTATTACCAACTTATGAATGGTTGGATCATACTCAAAGTTTTCAATGAGAAAGTCCTCAAACGCCTCCCAAAATGGCTGGTTCCCTTCATGTACGAAATGGCGTTTATTCTTCAGTCTTACTCGTTTCCCATTGACTTCCCAGCCTTGATGAACTGCGGCTATTTTCTCTTCTTTTCCCTTTTTTCGTTTACCTTGACGTTTTACAAACAAACCATCGACCTCTACAAATAATACAGGTTGATGTACATGCTCACGCTTTTTTGGAATACTCGAAACTTGTAATAAGTGTTGACGGATTGCCTCATGACTAATAACCCGATAGCCTAAAAGGGTTTCTAACGTACTGGCTGCTTTTCGATAGGAAGGTCCCTGAACAGCTAATTCAATAGCTACCTCCTCAATCAATGGGCTAAAAGAACCTGCATCCTCAAACTCTAAATAACGATCAAGGAGAAAAACATATTCCCCTGTCTCCCGGTCACGGTAATAATTACGATTTAATTCAATCTCTCCGAAGAGACTAGTTATATGATATTTTCTTTTATCAATGAGTCGATAGCGTTTTTTATCTCGTTCTTCTGCAATCTGTTGATCCATATCCTCCAAAATATTTTTCATAACGCTGGAGAAGGTATCTTGTAATTGCCTCCAAACCATTTGCTCAATTTCTTTTAAATTTGGATATACTGTGTTATTCTTTTGCATGAGGGGTTACTCCTTTGTTTGTGATTTAGTTTTGGTTGACTAAGATTCTACCAAGGAGTAACCCTCTTTTTCATGTTATTTGCTTATTAACTACCGCGCTTTCGCTTGCTTGCCCTTCATTTAGTGAACTCACTACGTTCGTTCACTAAATGAAGGGGATAAAATTTATTCCGCCCACAATAATTTTACTCATACAGTGGACAAGACAAAAAGTGGAAAAGTGAGACCATGGAGAGAAAAGAAAATCGCTAATGTTGATTACTTTGAACTTCTGCATATTCTTGAATTTAAAAAGGCTGAAAGAGTAAAAGATTGTGCTGAAATATTAGAGTATAAACAAAATCGTGAAACAGGCGAAAGAAAGTTGTATCGAGTGTGGTTTTGTAAATCCAGGCTTTGTCCAATGTGCAACTGGAGGAGAGCAATGAAACATGGCATTCAGTCACAAAAGGTTGTTGCTGAAGTTATTAAACAAAAGCCAACAGTTCGTTGGTTGTTTCTCACATTAACAGTTAAAAATGTTTATGATGGCGAAGAATTAAATAAGAGTTTGTCAGATATGGCTCAAGGATTTCGCCGAATGATGCAATATAAAAAAATTAATAAAAATCTTGTTGGTTTTATGCGTGCAACGGAAGTGACAATAAATAATAAAGATAATTCTTATAATCAGCACATGCATGTATTGGTATGTGTGGAACCAACTTATTTTAAGAATACAGAAAACTACGTGAATCAAAAACAATGGATTCAATTTTGGAAAAAGGCAATGAAATTAGACTATGATCCAAATGTAAAAGTTCAAATGATTCGACCGAAAAATAAATATAAATCGGATATACAATCGGCAATTGACGAAACTGCAAAATATCCTGTAAAGGATACGGATTTTATGACCGATGATGAAGAAAAGAATTTGAAACGTTTGTCTGATTTGGAGGAAGGTTTACACCGTAAAAGGTTAATCTCCTATGGTGGTTTGTTAAAAGAAATACATAAAAAATTAAACCTTGATGACACAGAAGAAGGCGATTTGATTCATACAGATGATGACGAAAAAGCCGATGAAGATGGATTTTCTATTATTGCAATGTGGAATTGGGAACGGAAAAATTATTTTATTAAAGAGTAGTTCAACAAACGGGCCAGTTTGTTGAAGATTAGATGCTATAATTGTTATTAAAAGGATTGAAGGATGCTTAGGAAGACGAGTTATTAATAGCTGAATAAGAACGGTGCTCTCCAAATATTCTTATTTAGAAAAGCAAATCTAAAATTATCTGAAAAGGGAATGAGAATAGTGAATGGACCAATAATAATGACTAGAGAAGAAAGAATGAAGATTGTTCATGAAATTAAGGAACGAATATTGGATAAATATGGGGATGATGTTAAGGCTATTGGTGTTTATGGCTCTCTTGGTCGTCAGACTGATGGGCCCTATTCGGATATTGAGATGATGTGTGTCATGTCAACAGAGGAAGCAGAGTTCAGCCATGAATGGACAACCGGTGAGTGGAAGGTGGAAGTGAATTTTGATAGCGAAGAGATTCTACTAGATTATGCATCTCAGGTGGAATCAGATTGGCCGCTTACACATGGTCAATTTTTCTCTATTTTGCCGATTTATGATTCAGGTGGATACTTAGAGAAAGTGTATCAAACTGCTAAATCGGTAGAAGCCCAAAAGTTCCACGATGCGATTTGTGCCCTTATCGTAGAAGAGCTGTTTGAATATGCAGGCAAATGGCGTAATATTCGTGTGCAAGGACCGACAACATTTCTACCATCCTTGACTGTACAGGTAGCAATGGCAGGTGCCATGTTGATTGGTCTGCATCATCGCATCTGTTATACGACGAGCGCTTCGGTCTTAACTGAAGCAGTTAAGCAATCAGATCTTCCTTCAGGTTATGACCATCTGTGCCAGTTCGTAATGTCTGGTCAACTTTCCGACTCTGAGAAACTTCTGGAATCGCTAGAGAATTTCTGGAATGGGATTCAGGAGTGGACAGAACGACACGGATATATAGTGGATGTGTCAAAACGCATACCATTTTGAACGATGACCTCTAATAATTGTTAATCATGTTGGTTACGTATTTATTAACTTCTCCTAGTATTAGTAATTATCATGGCTGTCATGGCGCATTAACGGAATAAAGGGTGTGCTTAAATCGGGCCATTTTGCGTAATAAGAAAAAGGATTAATTATGAGCGAATTGAATTAATAATAAGGTAATAGATTTACATTAGAAAATGAAAGGGGATTTTATGCGTGAGA
GAAAAGGCACTCGAATGAGTGCCTTTTGTGCGTTTTGAGCGTAGCGAAAAAACGGTTCTTTCTTATCTTGATACATATAGAAATAACGTCATTTTTATTTTAGTTGCTGAAAGGTGCGTTGAAGTGTTGGTATGTATGTGTTTTAAAGTATTGAAAACCCTTAAAATTGGTTGCACAGAAAAACCCCATCTGTTAAAGTTATAAGTGACCAAACAAATAACTAAATAGATGGGGGTTTCTTTTAATATTATGTGTCCTAATAGTAGCATTTATTCAGATGAAAAATCAAGGGTTTTAGTGGACAAGACAAAAAGTGGAAAAGTGAGACCATGGAGAGAAAAGAAAATCGCTAATGTTGATTACTTTGAACTTCTGCATATTCTTGAATTTAAAAAGGCTGAAAGAGTAAAAGATTGTGCTGAAATATTAGAGTATAAACAAAATCGTGAAACAGGCGAAAGAAAGTTGTATCGAGTGTTTGAGTCAAGTATTTATAGGCAGTTTTTTTAACACCTTAAATTTGAAAGCGGATTCAAACCTTAGGATACTCTCTTGGTAAGAATTTTGCCTTTTTTAAAAGCCAGACAACTCTTTTAATGCTTTGTAAACTGGTATGTTAGCTTTTCCTTTTAGATATAGAACATTGTCTCTAGTGGCTTCACCAATTGTGCTCGTAACTTTTTCTTTATAGTATCTTGGGGGGTTCTTTTCCACCTTTGTTTCAGTCCATTTTTCGATCCTGCCAAATAGTGTTTTTAAGGTCAATTTATCCAAGTAAGCTACCAAACCAGTGAACATGGCACTTACACCTTTATCCACCCAACTACGGCCATTTTTAAGTCTTTTGGCAAATACACTCATGGTTCCTTCTGCACTACCCATCGGACGCATTCCTGTTGTATCTATACCCTGTTCTTTAAGCCAGTTACGATAATCTCCCAAGGCTTCTGGATATTTCTCTAATTGGCGAATAAATGCTTCTAGACGTTCCTCTTGCTCATCATCCTCTAGCGTTCCGACTGCACTGTTAAGCTCTGTAAGCAATTTCTCATAATCATATGATGCAAGCGCCTTACGAATTGGACGATAACGTGGGTGATGACGGAACAAACTTCGAATCTCCCGTGCCACATGGAAACGATCAAGCGAAAAGAATGCACGATCTTTGAAATAGTCACGACAAGTTGTAATCCAATTTGCACCATCTCCATTTATTACCAACTTATGAATGGTTGGATCATACTCAAAGTTTTCAATGAGAAAGTCCTCAAACGCCTCCCAAAATGGCTGGTTCCCTTCATGTACGAAATGGCGTTTATTCTTCAGTCTTACTCGTTTCCCATTGACTTCCCAGCCTTGATGAACTGCGGCTATTTTCTCTTCTTTTCCCTTTTTTCGTTTACCTTGACGTTTTACAAACAAACCATCGACCTCTACAAATAATACAGGTTGATGTACATGCTCACGCTTTTTTGGAATACTCGAAACTTGTAATAAGTGTTGACGGATTGCCTCATGACTAATAACCCGATAGCCTAAAAGGGTTTCTAACGTACTGGCTGCTTTTCGATAGGAAGGTCCCTGAACAGCTAATTCAATAGCTACCTCCTCAATCAATGGGCTAAAAGAACCTGCATCCTCAAACTCTAAATAACGATCAAGGAGAAAAACATATTCCCCTGTCTCCCGGTCACGGTAATAATTACGATTTAATTCAATCTCTCCGAAGAGACTAGTTATATGATATTTTCTTTTATCAATGAGTCGATAGCGTTTTTTATCTCGTTCTTCTGCAATCTGTTGATCCATATCCTCCAAAATATTTTTCATAACGCTGGAGAAGGTATCTTGTAATTGCCTCCAAACCATTTGCTCAATTTCTTTTAAATTTGGATATACTGTGTTATTCTTTTGCATGAGGGGTTACTCCTTTGTTTGTGATTTAGTTTTGGTTGACTAAGATTCTACCAAGGAGTAACCCTCTTTTTCATGTTATTTGCTTATTAACTACCGCGCTTTCGCTTGCTTGCCCTTCATTTAGTGAACTCACTACGTTCGTTCACTAAATGAAGGGGATAAAATTTATTCCGCCCACAATAATTTTACTCATACAGTGGACAAGACAAAAAGTGGAAAAGTGAGACCATGGAGAGAAAAGAAAATCGCTAATGTTGATTACTTTGAACTTCTGCATATTCTTGAATTTAAAAAGGCTGAAAGAGTAAAAGATTGTGCTGAAATATTAGAGTATAAACAAAATCGTGAAACAGGCGAAAGAAAGTTGTATCGAGTGTGGTTTTGTAAATCCAGGCTTTGTCCAATGTGCAACTGGAGGAGAGCAATGAAACATGGCATTCAGTCACAAAAGGTTGTTGCTGAAGTTATTAAACAAAAGCCAACAGTTCGTTGGTTGTTTCTCACATTAACAGTTAAAAATGTTTATGATGGCGAAGAATTAAATAAGAGTTTGTCAGATATGGCTCAAGGATTTCGCCGAATGATGCAATATAAAAAAATTAATAAAAATCTTGTTGGTTTTATGCGTGCAACGGAAGTGACAATAAATAATAAAGATAATTCTTATAATCAGCACATGCATGTATTGGTATGTGTGGAACCAACTTATTTTAAGAATACAGAAAACTACGTGAATCAAAAACAATGGATTCAATTTTGGAAAAAGGCAATGAAATTAGACTATGATCCAAATGTAAAAGTTCAAATGATTCGACCGAAAAATAAATATAAATCGGATATACAATCGGCAATTGACGAAACTGCAAAATATCCTGTAAAGGATACGGATTTTATGACCGATGATGAAGAAAAGAATTTGAAACGTTTGTCTGATTTGGAGGAAGGTTTACACCGTAAAAGGTTAATCTCCTATGGTGGTTTGTTAAAAGAAATACATAAAAAATTAAACCTTGATGACACAGAAGAAGGCGATTTGATTCATACAGATGATGACGAAAAAGCCGATGAAGATGGATTTTCTATTATTGCAATGTGGAATTGGGAACGGAAAAATTATTTTATTAAAGAGTAGTTCAACAAACGGGCCAGTTTGTTGAAGATTAGATGCTATAATTGTTATTAAAAGGATTGAAGGATGCTTAGGAAGACGAGTTATTAATAGCTGAATAAGAACGGTGCTCTCCAAATATTCTTATTTAGAAAAGCAAATCTAAAATTATCTGAAAAGGGAATGAGAATAGTGAATGGACCAATAATAATGACTAGAGAAGAAAGAATGAAGATTGTTCATGAAATTAAGGAACGAATATTGGATAAATATGGGGATGATGTTAAGGCTATTGGTGTTTATGGCTCTCTTGGTCGTCAGACTGATGGGCCCTATTCGGATATTGAGATGATGTGTGTCATGTCAACAGAGGAAGCAGAGTTCAGCCATGAATGGACAACCGGTGAGTGGAAGGTGGAAGTGAATTTTGATAGCGAAGAGATTCTACTAGATTATGCATCTCAGGTGGAATCAGATTGGCCGCTTACACATGGTCAATTTTTCTCTATTTTGCCGATTTATGATTCAGGTGGATACTTAGAGAAAGTGTATCAAACTGCTAAATCGGTAGAAGCCCAAAAGTTCCACGATGCGATTTGTGCCCTTATCGTAGAAGAGCTGTTTGAATATGCAGGCAAATGGCGTAATATTCGTGTGCAAGGACCGACAACATTTCTACCATCCTTGACTGTACAGGTAGCAATGGCAGGTGCCATGTTGATTGGTCTGCATCATCGCATCTGTTATACGACGAGCGCTTCGGTCTTAACTGAAGCAGTTAAGCAATCAGATCTTCCTTCAGGTTATGACCATCTGTGCCAGTTCGTAATGTCTGGTCAACTTTCCGACTCTGAGAAACTTCTGGAATCGCTAGAGAATTTCTGGAATGGGATTCAGGAGTGGACAGAACGACACGGATATATAGTGGATGTGTCAAAACGCATACCATTTTGAACGATGACCTCTAATAATTGTTAATCATGTTGGTTACGTATTTATTAACTTCTCCTAGTATTAGTAATTATCATGGCTGTCATGGCGCATTAACGGAATAAAGGGTGTGCTTAAATCGGGCCATTTTGCGTAATAAGAAAAAGGATTAATTATGAGCGAATTGAATTAATAATAAGGTAATAGATTTACATTAGAAAATGAAAGGGGATTTTATGCGTGAGA
AT-rich region
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The information of repeat sequences |
Motif AYWAGASWAWAARYRRAAWMGTGARACMRKSGARAGAAARKWRWATCGM
Motif CTGCATMYTCWWRMWYTWAAWAASGMTSAARGAGWAAAASATWKTSC
Motif RACGCMTTCCNDHWTGRHYGATAMCCT
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The result of BLAST |
Download
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