RefSeq | NC_021665 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | pORI00000293 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 1133 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.6487 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 5056..6188 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
CTATTTAGTTATTTGTTTGGTCACTTATAACTTTAACAGATGGGGTTTTTCTGTGCAACCAATTTTAAGGGTTTTCAATACTTTAAAACACATACATACCAACACTTCAACGCACCTTTCAGCAACTAAAATAAAAATGACGTTATTTCTATATGTATCAAGAATAGAAAGAACTCGTTTTTCGCTACGCTCAAAACGCAAAAAAAGCACTCATTCGAGTGCTTTTTCTTATCGCTCCAAATCATGCGATTTTTTCCTCTTTGCTTTTCTTTGCTCACGAAGTTCTCGATCACGCTGCAAAACATCTTGAAGCGAAAAAGTATTCTTCTTTTCTTCCGATCGCTCATGCTGACGCACGAAAAGCCCTCTAGGCGCATAGGAACAACTCCTAAATGCATGTGAGGGGTTTTCTCGTCCATGTGAACAGTCGCATACGCAATATTTTGTTTCCCATAGCTAGTAAGCTTGGATCCTCGCGAGGCCGGCCAGTATTCTGACATGGGTGTATCAATAACCCATGCGTTTCCGTATTGTATCGGAATGGTTTCGGACAGGGCGGTGGGAATAGACATGGAAAAGATTTTTTTGCCCGAGGATGCATTGATAAAGTATTTCTTTTCCGAAAGAGAGGAAAAGATTCTAAAGAGTTTTGGAAATACTGATGAATATTGTGTGCAGAGTACAATTCTATGGACAAGAAAAGAGGCTTTGTCAAAACTTTTTCGTCTGGGAATGAGGATGGATTTTAAAAAGCTGGATACTTTGGAGGACGAGGTGGTTTTTCAGGAAACAAACAGGGCGCGTCTGTTTTCTTTTATATGCAATAATTACTGTATCTCTCTGGCATTGCCAGGTTTTAATAAAGATTAAAATTATTGACTAGAAATAAAAAAATTGTCCATAATATTAATGGACAAAAAAACAAAGAATTACATCAAAGGAAGATAAAAATACTTTGTTAAAAAATTAATTATTTTTTATCTAAACTATTGAAAATGAAAATAAAATAATATAAAATGAATCATAGTGCAAGAGATACTTGCCAGAGGATGAATATTTTACTGCATTCATGCTTTATGGCAGCTAATAGAGGCATTAAATTAAATTTTAATTTACAATAGGAGGCGATATTA
CTATTTAGTTATTTGTTTGGTCACTTATAACTTTAACAGATGGGGTTTTTCTGTGCAACCAATTTTAAGGGTTTTCAATACTTTAAAACACATACATACCAACACTTCAACGCACCTTTCAGCAACTAAAATAAAAATGACGTTATTTCTATATGTATCAAGAATAGAAAGAACTCGTTTTTCGCTACGCTCAAAACGCAAAAAAAGCACTCATTCGAGTGCTTTTTCTTATCGCTCCAAATCATGCGATTTTTTCCTCTTTGCTTTTCTTTGCTCACGAAGTTCTCGATCACGCTGCAAAACATCTTGAAGCGAAAAAGTATTCTTCTTTTCTTCCGATCGCTCATGCTGACGCACGAAAAGCCCTCTAGGCGCATAGGAACAACTCCTAAATGCATGTGAGGGGTTTTCTCGTCCATGTGAACAGTCGCATACGCAATATTTTGTTTCCCATAGCTAGTAAGCTTGGATCCTCGCGAGGCCGGCCAGTATTCTGACATGGGTGTATCAATAACCCATGCGTTTCCGTATTGTATCGGAATGGTTTCGGACAGGGCGGTGGGAATAGACATGGAAAAGATTTTTTTGCCCGAGGATGCATTGATAAAGTATTTCTTTTCCGAAAGAGAGGAAAAGATTCTAAAGAGTTTTGGAAATACTGATGAATATTGTGTGCAGAGTACAATTCTATGGACAAGAAAAGAGGCTTTGTCAAAACTTTTTCGTCTGGGAATGAGGATGGATTTTAAAAAGCTGGATACTTTGGAGGACGAGGTGGTTTTTCAGGAAACAAACAGGGCGCGTCTGTTTTCTTTTATATGCAATAATTACTGTATCTCTCTGGCATTGCCAGGTTTTAATAAAGATTAAAATTATTGACTAGAAATAAAAAAATTGTCCATAATATTAATGGACAAAAAAACAAAGAATTACATCAAAGGAAGATAAAAATACTTTGTTAAAAAATTAATTATTTTTTATCTAAACTATTGAAAATGAAAATAAAATAATATAAAATGAATCATAGTGCAAGAGATACTTGCCAGAGGATGAATATTTTACTGCATTCATGCTTTATGGCAGCTAATAGAGGCATTAAATTAAATTTTAATTTACAATAGGAGGCGATATTA
AT-rich region
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The information of repeat sequences |
Motif TBGYTTTTCBTDDCGCWCVAA
Motif GGAWACWHDSRRGGMSSRBSWGKWTTYT
Motif RRGRTTTTTTYGTCY
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The result of BLAST |
Download
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