RefSeq NC_019233
DoriC accession number pORI00000123
OriC length 467 nt
OriC AT content 0.5482
The location of oriC region 3905..4371 nt
Browse in NCBI
OriC map
OriC sequences
TAGTCCTAAATGAGCTTAGAACGCAAAGTATGGCCTTTTATGCCTATCTGGGCTTACCTGCCGAGCGTCAGTCGAGGCTTTTCCTGAACCACGCTTTTGATTTTGAATTTAGCGAGTGAACGAAGTGAACGCTGCAAGCAAAATGTGAGCGTGATTTTCGCTCACTCCTTTTTGGTTTTTGGTCCTGATTTGGCATTTTGGGGCACGGAGACGAAGTCGGAGACCCCCACCTCTTTTATAATCTCTTTTAAAACCTCTTTTAAAACCTCTTTTAAGGGCATGTTCCACGTTACTCTCCCAAGCGTTTCACAAATGTTTGGGGGTCCAATTGTCTGTTTATGGGGGTCCAATTGTCTGTTTATAGGGGTCCAATTGTCTGTTTATGGGGGTCCAATTGTCTGTTTATGGGGGTCTCGTCTTGAGGTTCCGGCCTTGATATGGTAGCCTCTGATTTAGGAGGTGGTTTT
TAGTCCTAAATGAGCTTAGAACGCAAAGTATGGCCTTTTATGCCTATCTGGGCTTACCTGCCGAGCGTCAGTCGAGGCTTTTCCTGAACCACGCTTTTGATTTTGAATTTAGCGAGTGAACGAAGTGAACGCTGCAAGCAAAATGTGAGCGTGATTTTCGCTCACTCCTTTTTGGTTTTTGGTCCTGATTTGGCATTTTGGGGCACGGAGACGAAGTCGGAGACCCCCACCTCTTTTATAATCTCTTTTAAAACCTCTTTTAAAACCTCTTTTAAGGGCATGTTCCACGTTACTCTCCCAAGCGTTTCACAAATGTTTGGGGGTCCAATTGTCTGTTTATGGGGGTCCAATTGTCTGTTTATAGGGGTCCAATTGTCTGTTTATGGGGGTCCAATTGTCTGTTTATGGGGGTCTCGTCTTGAGGTTCCGGCCTTGATATGGTAGCCTCTGATTTAGGAGGTGGTTTT
AT-rich region
The information of repeat sequences

Motif GGGGTCCAATTGTCTGTTTAT

StartP-valueSite
3861.18e-12TCTGTTTATGGGGGTCCAATTGTCTGTTTATGGGGGTCTCG
3641.18e-12TCTGTTTATAGGGGTCCAATTGTCTGTTTATGGGGGTCCAA
3421.18e-12TCTGTTTATGGGGGTCCAATTGTCTGTTTATAGGGGTCCAA
3201.18e-12CAAATGTTTGGGGGTCCAATTGTCTGTTTATGGGGGTCCAA

Motif AACCTCTTTTA

StartP-valueSite
2643.47e-07CCTCTTTTAAAACCTCTTTTAAGGGCATGTT
2523.47e-07TCTCTTTTAAAACCTCTTTTAAAACCTCTTT
2287.00e-07CGGAGACCCCCACCTCTTTTATAATCTCTTT
2401.29e-06CCTCTTTTATAATCTCTTTTAAAACCTCTTT

Motif AARTGARCKYWGMAMGCAAA

StartP-valueSite
1234.49e-12CGAGTGAACGAAGTGAACGCTGCAAGCAAAATGTGAGCGT
89.18e-12TAGTCCTAAATGAGCTTAGAACGCAAAGTATGGCCTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000123 100.0 467 0 0 1 467 1 467 0.0 863
pORI00000123 98.0 50 1 0 364 413 320 369 1.57e-18 88
pORI00000123 98.0 50 1 0 320 369 364 413 1.57e-18 88
pORI00000123 100.0 30 0 0 384 413 318 347 4.43e-09 57
pORI00000123 100.0 30 0 0 318 347 384 413 4.43e-09 57
pORI00000172 89.655 406 39 3 2 405 349 753 0.0 514
pORI00000934 96.8 250 3 4 218 467 628 872 0.0 412
pORI00000934 90.173 173 12 5 8 178 452 621 0.0 220
pORI00000934 97.872 47 0 1 320 366 773 818 2.63e-16 81
pORI00000375 90.323 93 9 0 81 173 426 334 4.31e-29 122
pORI00000376 98.462 65 1 0 108 172 648 712 7.21e-27 115
pORI00000208 91.566 83 6 1 92 173 1074 1156 2.59e-26 113
pORI00000007 96.97 66 2 0 108 173 1088 1153 9.32e-26 111