RefSeq NC_010907
DoriC accession number pORI00000083
OriC length 846 nt
OriC AT content 0.6489
The location of oriC region 1765..2610 nt
Browse in NCBI
OriC map
OriC sequences
AAACTGCTTTTCCTTCCTGTGTTTTTGGTAATTGTTATATTTAGGATTTATGATTATTTCCTTTCTAACCTAAATAATTTTTTAATATTGAATCCGCTTTCATTATACTACTTGTCATTTCCGATGTCTATTATTTTAAGGTTTTATTCAACAATAATGACTTAGCGGAAGGCACAAAAATAGTCGCAATATGGAATGCAACTAAGCAAAATTATTTTTTGAAGTAGTTTTGTTTTTATTTCAGGCAAGCAACGGGTTTGTGTACACAAACCCCAAAAACGTAGTTTTTGACTTGTTAGGAGAATTCCTAAAACCTTAACGAAAAAAGACCAGCATTCGTTTAAAAATACTGGTCTTTTTTAATGTCATTGCATTCGATTTTTTACTCACTAACGTTCGTATGATTTTATTTTTTCGTTGGAAATCATTCCAACTGAAAAAATAAAATGGCAATCATTTAGTCGAGCATAGCGACAAATTCAGGTGACATCATCTGAATAAGGTCTTAGGAACCCTAACAAGTCATTTAAGCGGTTTGTATATACAAACCCGTTGCTTGCCTGAATCAAATTGTAAAATGGCTTAGAAGGCAAATATGAGCCTTCTGAGAGGTTTTAGAGATAAGCTAAGCGATTTATGCCGTGAAAGCTCCTTGACGATAAGCAGGGACAAGGTAGACTTAGCTGGGGCGGTTCGGTCAGAACTTTGTTCGGCCGACCGACAAAGCAAGTATTACCGTCCCTGGTTTCTTGTTGTCAAGGAGACCATGGAATAAAGCAAGCGGACTTGAAGGAAAATCTATCAAGTAGTATAATTAAGTAAAATATTAAGTAAGTAGGTGAGGCT
AAACTGCTTTTCCTTCCTGTGTTTTTGGTAATTGTTATATTTAGGATTTATGATTATTTCCTTTCTAACCTAAATAATTTTTTAATATTGAATCCGCTTTCATTATACTACTTGTCATTTCCGATGTCTATTATTTTAAGGTTTTATTCAACAATAATGACTTAGCGGAAGGCACAAAAATAGTCGCAATATGGAATGCAACTAAGCAAAATTATTTTTTGAAGTAGTTTTGTTTTTATTTCAGGCAAGCAACGGGTTTGTGTACACAAACCCCAAAAACGTAGTTTTTGACTTGTTAGGAGAATTCCTAAAACCTTAACGAAAAAAGACCAGCATTCGTTTAAAAATACTGGTCTTTTTTAATGTCATTGCATTCGATTTTTTACTCACTAACGTTCGTATGATTTTATTTTTTCGTTGGAAATCATTCCAACTGAAAAAATAAAATGGCAATCATTTAGTCGAGCATAGCGACAAATTCAGGTGACATCATCTGAATAAGGTCTTAGGAACCCTAACAAGTCATTTAAGCGGTTTGTATATACAAACCCGTTGCTTGCCTGAATCAAATTGTAAAATGGCTTAGAAGGCAAATATGAGCCTTCTGAGAGGTTTTAGAGATAAGCTAAGCGATTTATGCCGTGAAAGCTCCTTGACGATAAGCAGGGACAAGGTAGACTTAGCTGGGGCGGTTCGGTCAGAACTTTGTTCGGCCGACCGACAAAGCAAGTATTACCGTCCCTGGTTTCTTGTTGTCAAGGAGACCATGGAATAAAGCAAGCGGACTTGAAGGAAAATCTATCAAGTAGTATAATTAAGTAAAATATTAAGTAAGTAGGTGAGGCT
AT-rich region
The information of repeat sequences

Motif AASSGRTTTRTRTMBWSAAASCYS

StartP-valueSite
2517.78e-14TCAGGCAAGCAACGGGTTTGTGTACACAAACCCCAAAAACGTAG
5298.74e-13CAAGTCATTTAAGCGGTTTGTATATACAAACCCGTTGCTTGCCT
6282.57e-11GAGATAAGCTAAGCGATTTATGCCGTGAAAGCTCCTTGACGATA

Motif GTYVRGSMKASCRWSRAAKHMAG

StartP-valueSite
7081.71e-12TCAGAACTTTGTTCGGCCGACCGACAAAGCAAGTATTACCGTC
4611.11e-11CAATCATTTAGTCGAGCATAGCGACAAATTCAGGTGACATCAT
7551.03e-10GTTTCTTGTTGTCAAGGAGACCATGGAATAAAGCAAGCGGACT

Motif GAAGGMAMA

StartP-valueSite
5863.53e-06AAATGGCTTAGAAGGCAAATATGAGCCTT
1685.34e-06TGACTTAGCGGAAGGCACAAAAATAGTCG
7891.23e-05AAGCGGACTTGAAGGAAAATCTATCAAGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000083 100.0 846 0 0 1 846 1 846 0.0 1563
pORI00000029 93.782 788 40 8 1 783 1 784 0.0 1175
pORI00000028 93.782 788 40 8 1 783 1 784 0.0 1175
pORI00000002 90.958 553 42 8 234 783 227 774 0.0 737
pORI00000217 91.131 327 29 0 457 783 336 662 0.0 444
pORI00000217 88.525 183 12 9 236 414 161 338 0.0 213
pORI00000295 88.889 297 30 3 353 647 129 424 0.0 363