RefSeq NC_003458
DoriC accession number pORI00000367
OriC length 641 nt
OriC AT content 0.5601
The location of oriC region 2293..2933 nt
Browse in NCBI
OriC map
OriC sequences
CTTTTAAAAAGCGTTAAATGGGCCATGCTAACGGTTCTGGATCTGACGGGTACAATTGCTGCTCTCTACATCAAAAACGGCTTAGAACGCAAATATAAGCGTTCTAAGCCGTTTTTATTAGCCTATATTCATGGCACAAATGAAAAGCGTTAGTGATGAATCAAATTTAGGCAACGTGCTTTTGTTGGTGAATGGCGATAGTCCCACCGAAGCTTCAGCTGAGGTTCTTCTGAGCCACGCAAGCGAAGCGCGCTAGGGCAAGCCAAAGGCGCGCAGGCATAGCCGGAGTTAAATGTGGCGAAGCCACACCTTTTTTAGGGAGCGAAGCAACCAAGGGTTGTATGGGGTTTGGGGAGAGGTTCTCCCCAAGGTCTTGTTTCCCTTGTTTTTTGAGGGTCCCTCTTTATATACTCTTTAAACCTCTTTAAACCTCTTTAGATCTCTCGATCCCTTACTCCTGCAATGGGTTTCAGCATCAACTTGGGTCTTTTTACGCGCTTATTTGGGTCTTTTTACGCGCTTATTTGGGTCTTTTTACGCGCTTATTTGGGTCTTTTTACGCATTTAGTTAAGTCCATTTTAACGTTAGACTCAAGTTTGCGTTATAATGGCGTTTAAACAAAGGCTTATGGAGGCGTTTT
CTTTTAAAAAGCGTTAAATGGGCCATGCTAACGGTTCTGGATCTGACGGGTACAATTGCTGCTCTCTACATCAAAAACGGCTTAGAACGCAAATATAAGCGTTCTAAGCCGTTTTTATTAGCCTATATTCATGGCACAAATGAAAAGCGTTAGTGATGAATCAAATTTAGGCAACGTGCTTTTGTTGGTGAATGGCGATAGTCCCACCGAAGCTTCAGCTGAGGTTCTTCTGAGCCACGCAAGCGAAGCGCGCTAGGGCAAGCCAAAGGCGCGCAGGCATAGCCGGAGTTAAATGTGGCGAAGCCACACCTTTTTTAGGGAGCGAAGCAACCAAGGGTTGTATGGGGTTTGGGGAGAGGTTCTCCCCAAGGTCTTGTTTCCCTTGTTTTTTGAGGGTCCCTCTTTATATACTCTTTAAACCTCTTTAAACCTCTTTAGATCTCTCGATCCCTTACTCCTGCAATGGGTTTCAGCATCAACTTGGGTCTTTTTACGCGCTTATTTGGGTCTTTTTACGCGCTTATTTGGGTCTTTTTACGCGCTTATTTGGGTCTTTTTACGCATTTAGTTAAGTCCATTTTAACGTTAGACTCAAGTTTGCGTTATAATGGCGTTTAAACAAAGGCTTATGGAGGCGTTTT
AT-rich region
The information of repeat sequences

Motif TTGGGTCTTTTTACGCGCTTA

StartP-valueSite
5258.97e-13ACGCGCTTATTTGGGTCTTTTTACGCGCTTATTTGGGTCTT
5038.97e-13ACGCGCTTATTTGGGTCTTTTTACGCGCTTATTTGGGTCTT
4818.97e-13CAGCATCAACTTGGGTCTTTTTACGCGCTTATTTGGGTCTT
5474.64e-12ACGCGCTTATTTGGGTCTTTTTACGCATTTAGTTAAGTCCA

Motif AGCGAAGC

StartP-valueSite
3217.15e-06TTTTTTAGGGAGCGAAGCAACCAAGGGT
2427.15e-06GAGCCACGCAAGCGAAGCGCGCTAGGGC
2062.60e-05CGATAGTCCCACCGAAGCTTCAGCTGAG
2973.31e-05AGTTAAATGTGGCGAAGCCACACCTTTT
2334.96e-05GGTTCTTCTGAGCCACGCAAGCGAAGCG

Motif CCTCTTTA

StartP-valueSite
4302.27e-05CCTCTTTAAACCTCTTTAGATCTCTCGA
4202.27e-05ACTCTTTAAACCTCTTTAAACCTCTTTA
3992.27e-05TTTGAGGGTCCCTCTTTATATACTCTTT
4104.88e-05CTCTTTATATACTCTTTAAACCTCTTTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000489 100.0 641 0 0 1 641 1 641 0.0 1184
pORI00000367 100.0 641 0 0 1 641 1 641 0.0 1184
pORI00000622 90.4 375 34 2 2 375 661 288 0.0 492
pORI00000441 84.35 377 31 11 3 375 648 296 0.0 344
pORI00000388 92.357 157 9 3 221 375 3650 3805 0.0 220
pORI00000621 100.0 53 0 0 386 438 266 214 1.01e-21 99
pORI00000285 92.308 65 4 1 312 375 59 123 1.69e-19 92