RefSeq NC_025132
DoriC accession number pORI00000621
OriC length 387 nt
OriC AT content 0.615
The location of oriC region 401..787 nt
Browse in NCBI
OriC map
OriC sequences
AAAGCACCTCTAAATGTTGATAGATAAATCCTACAGTGGATAACTGACGATGTCAAAAAAAAGTCTCGTTAATTGACGGACTTCTCTTGGACAAAATCTCGTCAATAAGCGGACAAAATCTCGTCAATAAGCGGACAAAATCTCGTCAATAAGCGGACAAAATCTCGTTAATAGATTGCTGTATCCATTGCTGCACAAGGATTACAGCACCCCCTAAAGAGGTTTAAAGAGGTTTAAAGAGTATATAAAGAGGGACCCTCAAAAAAAACGAGGTTCTTAGTTTATGCCACATATTATTGACCAAATCCAAGCGTCTTTTGTTGACAAACCTGTACGTACAGGTAAAATAAGCTCTGTAAGTGAAATCGCTTTCTGGAGGGGGAAGAA
AAAGCACCTCTAAATGTTGATAGATAAATCCTACAGTGGATAACTGACGATGTCAAAAAAAAGTCTCGTTAATTGACGGACTTCTCTTGGACAAAATCTCGTCAATAAGCGGACAAAATCTCGTCAATAAGCGGACAAAATCTCGTCAATAAGCGGACAAAATCTCGTTAATAGATTGCTGTATCCATTGCTGCACAAGGATTACAGCACCCCCTAAAGAGGTTTAAAGAGGTTTAAAGAGTATATAAAGAGGGACCCTCAAAAAAAACGAGGTTCTTAGTTTATGCCACATATTATTGACCAAATCCAAGCGTCTTTTGTTGACAAACCTGTACGTACAGGTAAAATAAGCTCTGTAAGTGAAATCGCTTTCTGGAGGGGGAAGAA
AT-rich region
The information of repeat sequences

Motif CAAAATCTCGTYAATARRCGG

StartP-valueSite
1366.57e-13AATAAGCGGACAAAATCTCGTCAATAAGCGGACAAAATCTC
1146.57e-13AATAAGCGGACAAAATCTCGTCAATAAGCGGACAAAATCTC
926.57e-13TTCTCTTGGACAAAATCTCGTCAATAAGCGGACAAAATCTC
1588.54e-11AATAAGCGGACAAAATCTCGTTAATAGATTGCTGTATCCAT
591.09e-10GATGTCAAAAAAAAGTCTCGTTAATTGACGGACTTCTCTTG

Motif TAAAGAGG

StartP-valueSite
2463.39e-05AAAGAGTATATAAAGAGGGACCCTCAAA
2253.39e-05TAAAGAGGTTTAAAGAGGTTTAAAGAGT
2153.39e-05CAGCACCCCCTAAAGAGGTTTAAAGAGG
2351.18e-04TAAAGAGGTTTAAAGAGTATATAAAGAG
321.30e-04AGATAAATCCTACAGTGGATAACTGACG

Motif GCACCYC

StartP-valueSite
2071.64e-05AAGGATTACAGCACCCCCTAAAGAGGT
43.87e-05AAAGCACCTCTAAATGTTGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000621 100.0 387 0 0 1 387 1 387 0.0 715
pORI00000621 97.561 41 1 0 133 173 89 129 1.3e-13 71
pORI00000621 97.561 41 1 0 89 129 133 173 1.3e-13 71
pORI00000489 100.0 53 0 0 214 266 438 386 5.96e-22 99
pORI00000367 100.0 53 0 0 214 266 438 386 5.96e-22 99