RefSeq | NC_010913 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | pORI00000441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 2092 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.5817 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 2363..4454 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
CAATCATTAATTAACCCTCCTTCGCACTAAAAATAGTATAGCACTGTTTATAATGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTATTAGTGCATTTAGACCCGCGGTTGAGCCATTCTCGCCTCCCTAAGTACTTAAAGTATTTAAAAGTATTTAGAAGTATATATAGCGCGCGCGAGGCTTGCGTTTGTGTTTTGCTTGTTAATAATCACAAAAGACCTTGGGGAGAACCTCTCCCCAAACCCCATACAAAATCCTGGTCGCTTTGCTCCCTAAAAAGGTGTGGCTGCGCCACATTTAACTCCGGCTTCGCCTGCGCGCTTCGCTTGCGTGGCTCAGAAGAACCTCAGCTGAAGCTTCGGTAGGGCTATCGCCATTCACCGACAAAAGCACGTTACCTAAATTTGATCAATCACTAAAGCTTTTTATTAGTGTCATGAACCTATGCTGATAAAAGCGGCTTAGAACGCTTATATTTGCGTTCTAAGCCGCTTTTGATGTAGAGAGCATATAATTCTACCCGCCAGAGCAAGAAACGCTAGTACAGGCCCTTTAGCGCTTTTTAAACTCACTGCTTTGATAACCAGTCCTCAATGATATTTGATTTGGTCACGCTGACATGGTACTTAGCCAGTTCCGGATTTTGATTCACTTCCTGTTGCTTTTTTGCGACCAGCTGATTCAATTTCGCAATCGCCTGATCGGTCAAAGTGAACATGACCCGGTGTGTTTCGTCTTGCTTTGTCATTTCAAAAACCTCCTGAATGGTGATGATGAATTGTCGTCTAGAAAACCAACGCGGCGTTTAAATGGCGTCACGTTACCGGACGATTTTTGGTCAACAGTTGCGACGGCCCTGGTCAAAACGTGAACGTTTTTCTCCAGGTAAAAGATCAAAATAAATCGAGTTGTGATCCGTTCCATCTCAAAAATCGGCTCGGTTGGATCGAGGACTTTTTAAGGCTGATTGGAACGCTCCTAAAATCATGAAAGAGCATAAGGCAAAACTGACCCCAAAATTGGGGTAAACCGCAGTGCGGTTTGGTTTGTCGTGATAGCACGTTGGGGTCAAAAGGTGTCGTAAAACACGATTCACTCCACGTGAAAAAATTACGAACGTGTCGTAAAACGCGTTTTACGACACGTGGATGATGCCAGTTACGACAAGGGCTAGCGCCATTCACTACACGTAAACAGTTTTTTACTACACCTGAGCAAGATTATTCGCTTATTGGGCATAAACGAACGATTTTTGGCGTTGCAGAACACACAACTATATAGTGACTTGATTGCAACGAGGGGTACGTATAGCGAGTTACTCGAATTTAAGCATAGATGTTGCTTTAACAGAAACTGTCGAGATGCTTGTAACGCAACAAAATATTGAATTAACCGCAACTCTGAAACTGCACAAACATCAACGAAACTGTTTCTTAAATGCAACTCATATATTACACAATATTCAACTTGAGTGAAACTCTAAATGAATGTAGGTGTCAACACTGCGTGTAACATTATGCAAAAGCCAGCGAAAAGATGCCATCAGGTGCTGTTTGAATTTTGGCTTTGGAGGAGCGACTCACCCCTCTTCAAAATAACAGGGAAATTGGGGGCGTGCCCCCAAACAAAATTGACGATCAGCGCAGCTGAGATTGGGTCAATTCATCGCAAGTGTACGTACACTTGCAAATCTCGCGACAGTAGAAAAACATCAAAAAGCAAAATCTGTCATTTACGGATTTTGCTTTTTATTTGAGATTCATAGTTGGTACTCGGTCACTTAAAAATAACGCATTTCCAATGGAGACGCTAATTACTTTTGAGCTATTCAAGCACATTTTTCTCAGCACATTTAGCGACTTCTTCGGTGTGTTTCGCTCTAGATCAATTCACTTAGGCAGTGGTTTTATAGGCTAATAATAATTGAACTTTATGAGTTGTTCATCTATTGTTAACACCAAATCATCGGTTGATCACCACATGGTTTAACAACTATTGAGGAGGAACTCAT
CAATCATTAATTAACCCTCCTTCGCACTAAAAATAGTATAGCACTGTTTATAATGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTGTCGTGTACTTTTTGGTGTTGTATTAGTGCATTTAGACCCGCGGTTGAGCCATTCTCGCCTCCCTAAGTACTTAAAGTATTTAAAAGTATTTAGAAGTATATATAGCGCGCGCGAGGCTTGCGTTTGTGTTTTGCTTGTTAATAATCACAAAAGACCTTGGGGAGAACCTCTCCCCAAACCCCATACAAAATCCTGGTCGCTTTGCTCCCTAAAAAGGTGTGGCTGCGCCACATTTAACTCCGGCTTCGCCTGCGCGCTTCGCTTGCGTGGCTCAGAAGAACCTCAGCTGAAGCTTCGGTAGGGCTATCGCCATTCACCGACAAAAGCACGTTACCTAAATTTGATCAATCACTAAAGCTTTTTATTAGTGTCATGAACCTATGCTGATAAAAGCGGCTTAGAACGCTTATATTTGCGTTCTAAGCCGCTTTTGATGTAGAGAGCATATAATTCTACCCGCCAGAGCAAGAAACGCTAGTACAGGCCCTTTAGCGCTTTTTAAACTCACTGCTTTGATAACCAGTCCTCAATGATATTTGATTTGGTCACGCTGACATGGTACTTAGCCAGTTCCGGATTTTGATTCACTTCCTGTTGCTTTTTTGCGACCAGCTGATTCAATTTCGCAATCGCCTGATCGGTCAAAGTGAACATGACCCGGTGTGTTTCGTCTTGCTTTGTCATTTCAAAAACCTCCTGAATGGTGATGATGAATTGTCGTCTAGAAAACCAACGCGGCGTTTAAATGGCGTCACGTTACCGGACGATTTTTGGTCAACAGTTGCGACGGCCCTGGTCAAAACGTGAACGTTTTTCTCCAGGTAAAAGATCAAAATAAATCGAGTTGTGATCCGTTCCATCTCAAAAATCGGCTCGGTTGGATCGAGGACTTTTTAAGGCTGATTGGAACGCTCCTAAAATCATGAAAGAGCATAAGGCAAAACTGACCCCAAAATTGGGGTAAACCGCAGTGCGGTTTGGTTTGTCGTGATAGCACGTTGGGGTCAAAAGGTGTCGTAAAACACGATTCACTCCACGTGAAAAAATTACGAACGTGTCGTAAAACGCGTTTTACGACACGTGGATGATGCCAGTTACGACAAGGGCTAGCGCCATTCACTACACGTAAACAGTTTTTTACTACACCTGAGCAAGATTATTCGCTTATTGGGCATAAACGAACGATTTTTGGCGTTGCAGAACACACAACTATATAGTGACTTGATTGCAACGAGGGGTACGTATAGCGAGTTACTCGAATTTAAGCATAGATGTTGCTTTAACAGAAACTGTCGAGATGCTTGTAACGCAACAAAATATTGAATTAACCGCAACTCTGAAACTGCACAAACATCAACGAAACTGTTTCTTAAATGCAACTCATATATTACACAATATTCAACTTGAGTGAAACTCTAAATGAATGTAGGTGTCAACACTGCGTGTAACATTATGCAAAAGCCAGCGAAAAGATGCCATCAGGTGCTGTTTGAATTTTGGCTTTGGAGGAGCGACTCACCCCTCTTCAAAATAACAGGGAAATTGGGGGCGTGCCCCCAAACAAAATTGACGATCAGCGCAGCTGAGATTGGGTCAATTCATCGCAAGTGTACGTACACTTGCAAATCTCGCGACAGTAGAAAAACATCAAAAAGCAAAATCTGTCATTTACGGATTTTGCTTTTTATTTGAGATTCATAGTTGGTACTCGGTCACTTAAAAATAACGCATTTCCAATGGAGACGCTAATTACTTTTGAGCTATTCAAGCACATTTTTCTCAGCACATTTAGCGACTTCTTCGGTGTGTTTCGCTCTAGATCAATTCACTTAGGCAGTGGTTTTATAGGCTAATAATAATTGAACTTTATGAGTTGTTCATCTATTGTTAACACCAAATCATCGGTTGATCACCACATGGTTTAACAACTATTGAGGAGGAACTCAT
AT-rich region
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The information of repeat sequences |
Motif TGTGTCGTGTACTTTTTGGTG
Motif RMRCGWTTYACTMCACGTVAA
Motif TGCWBRWMMMDCAACDAWAYWKTKWMTTRAHYGCAAC
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The result of BLAST |
Download
|