RefSeq NC_010816.1
Accession number NC_010816.1
DoriC accession number ORI92510428
OriC length 734 nt
OriC AT content 0.512262
The location of oriC region 1665195..1665928 nt
Browse in NCBI
OriC map
OriC sequences
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnanGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaa
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA
dnaNGTGTGATTGTTCCCTTCGTCGGATTGGCTGAGGAATATTCTAGCCGTTAGGTGGCGAACTTACGTACGCTGGATGACCGGCTGTTACTATGGCGATGATGCTTTTCACGTAACTGAGTAAGTAATCGCCATAATAAGGCCGGTGGATAGTGTGGATAAGTAGGGCTGAGCCCTACAACTGCAACGGTTCATAAGTCCCTGAAAATTGTGGACAAATTCTGCATGGCTTGTGGATAAGTGGGCGAGTTTTCCACAGCCAGTTCGTCGAATTTGAGTTTTCCACATCGAGGTCGCGGTTATGCACGAGTTTTCCACAACAAAATAGTGGGTAATCCACGAGTTATCCGCCGAGTTTACCCACATCTGTGCACAACTATGTGGATAACTTTTTTGGTTTTCGCACTTTCGCACGGCGTGTTGAAGACTGTTTTTCGTCGAGGAGAATCGATTCTGGAGACCGTTTTCGGCACTTTTTCCGTCTCGCTCGCCCAAACCCGCAAAATCGGTCCTCAGAATCGATTCTCTCGTTTCATGGTTTTTTGCGTGTTCCCCTTCGAAACTCCCCTCAGTCGTCTGCGCCGACAGATCCCCTCACAAAGGGGAGCCATGAGGAATCTAATGTCTCGAATCCGTTGCCTCGACGTATCCACCAGAATCCGCCTGAGCAACCAAAAACGGCACTTTTCGGAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTCTCTCAGAAGCGTTGTGdnaA

5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CGAGTTWTCCACM

StartP-valueSite
3031.65e-08CGGTTATGCACGAGTTTTCCACAACAAAATAGT
2421.65e-08GATAAGTGGGCGAGTTTTCCACAGCCAGTTCGT
2711.54e-07TCGTCGAATTTGAGTTTTCCACATCGAGGTCGC
3362.97e-07GGGTAATCCACGAGTTATCCGCCGAGTTTACCC
6385.60e-07TCCGTTGCCTCGACGTATCCACCAGAATCCGCC

Motif TGTGGAYAAVT

StartP-valueSite
3765.54e-07TGCACAACTATGTGGATAACTTTTTTGGTTT
2285.54e-07CTGCATGGCTTGTGGATAAGTGGGCGAGTTT
1505.54e-07CGGTGGATAGTGTGGATAAGTAGGGCTGAGC
2061.51e-06CCCTGAAAATTGTGGACAAATTCTGCATGGC
3642.54e-06TACCCACATCTGTGCACAACTATGTGGATAA

Motif CCHAAAACBGCA

StartP-valueSite
6689.39e-08GCCTGAGCAACCAAAAACGGCACTTTTCGGAA
1711.05e-06AGGGCTGAGCCCTACAACTGCAACGGTTCATA
6971.16e-06GAAAGTCAGTCCAAAAAGTGCCGTTTTTCGTC
4871.54e-06GTCTCGCTCGCCCAAACCCGCAAAATCGGTCC

Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96010039 100.0 734 0 0 1 734 1 734 0.0 1356
ORI92510428 100.0 734 0 0 1 734 1 734 0.0 1356
ORI94010807 99.864 735 0 1 1 734 735 1 0.0 1351
ORI94010774 99.728 735 1 1 1 734 1 735 0.0 1345
ORI94010809 99.592 735 2 1 1 734 735 1 0.0 1339
ORI93010675 97.415 735 18 1 1 734 735 1 0.0 1251
ORI96010036 77.672 421 72 19 116 526 460 52 0.0 237