RefSeq NC_012726.1
DoriC accession number aORI10010075
OriC length 189 nt
OriC AT content 0.7143
The location of oriC region 1261758..1261946 nt
Browse in NCBI
OriC map
OriC sequences
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGGTTAAATTATAAGTACATTGAAAGAATGATCAAGATTATACAAACCATTCATTTTAATCCTCTTATAATAGAAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGGTTAAATTATAAGTACATTGAAAGAATGATCAAGATTATACAAACCATTCATTTTAATCCTCTTATAATAGAAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGGTTAAATTATAAGTACATTGAAAGAATGATCAAGATTATACAAACCATTCATTTTAATCCTCTTATAATAGAAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
ORB     AT-rich region
The information of repeat sequences

Motif AVTAGWAG

StartP-valueSite
1733.14e-05AGTTATAGCAAGTAGGAGGGAGAATTT
1573.14e-05TAATCTTTGTACTAGAAGTTATAGCAAG
1278.51e-05GAAGCAGATCAGTAGTAGTAGTAATCTA
1133.03e-04ATCCTCTTATAATAGAAGCAGATCAGTA
304.04e-04CATTATAATTACTACTACTATATGTAGG

Motif CCMTTC

StartP-valueSite
55.06e-05CTTTCCCTTCTCCTTTTGGC
911.76e-04ATTATACAAACCATTCATTTTAATCC

Motif TCCTYT

StartP-valueSite
1041.31e-04TTCATTTTAATCCTCTTATAATAGAA
114.72e-04CTTTCCCTTCTCCTTTTGGCATTATA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010075 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010072 99.471 189 1 0 1 189 1 189 0.0 344
aORI10010060 99.471 189 1 0 1 189 1 189 0.0 344
aORI10010268 97.884 189 4 0 1 189 1 189 0.0 327
aORI10010116 97.884 189 4 0 1 189 1 189 0.0 327
aORI10010113 97.884 189 4 0 1 189 1 189 0.0 327
aORI10010087 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010066 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010063 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010069 96.825 189 6 0 1 189 189 1 0.0 316
aORI10010360 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010338 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010335 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010332 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010111 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010012 80.0 190 34 3 1 189 188 2 1.72e-34 137