RefSeq NC_012588.1
DoriC accession number aORI10010060
OriC length 189 nt
OriC AT content 0.7196
The location of oriC region 1280986..1281174 nt
Browse in NCBI
OriC map
OriC sequences
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGATTAAATTATAAGTACATTGAAAGAATGATCAAGATTATACAAACCATTCATTTTAATCCTCTTATAATAGAAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGATTAAATTATAAGTACATTGAAAGAATGATCAAGATTATACAAACCATTCATTTTAATCCTCTTATAATAGAAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGATTAAATTATAAGTACATTGAAAGAATGATCAAGATTATACAAACCATTCATTTTAATCCTCTTATAATAGAAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
ORB     AT-rich region
The information of repeat sequences

Motif AGTAGNAG

StartP-valueSite
1731.38e-05AGTTATAGCAAGTAGGAGGGAGAATTT
1274.83e-05GAAGCAGATCAGTAGTAGTAGTAATCTA
1167.49e-05CTCTTATAATAGAAGCAGATCAGTAGTA
1571.08e-04TAATCTTTGTACTAGAAGTTATAGCAAG

Motif CCMTTC

StartP-valueSite
55.06e-05CTTTCCCTTCTCCTTTTGGC
911.78e-04ATTATACAAACCATTCATTTTAATCC

Motif TCCTYT

StartP-valueSite
1041.31e-04TTCATTTTAATCCTCTTATAATAGAA
114.72e-04CTTTCCCTTCTCCTTTTGGCATTATA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010072 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010060 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010075 99.471 189 1 0 1 189 1 189 0.0 344
aORI10010268 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010116 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010113 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010087 96.825 189 6 0 1 189 1 189 0.0 316
aORI10010066 96.825 189 6 0 1 189 1 189 0.0 316
aORI10010063 96.825 189 6 0 1 189 1 189 0.0 316
aORI10010069 96.296 189 7 0 1 189 189 1 0.0 311
aORI10010360 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010338 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010335 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010332 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010111 80.0 190 34 3 1 189 188 2 1.72e-34 137
aORI10010012 80.0 190 34 3 1 189 188 2 1.72e-34 137