RefSeq NC_012623.1
DoriC accession number aORI10010069
OriC length 189 nt
OriC AT content 0.7143
The location of oriC region 1314799..1314987 nt
Browse in NCBI
OriC map
OriC sequences
AAATTCTCCCTCCTACTTGCTATAACTTCTAGTACAAAGATTAAATAGATTACTACTACTACTGATCTGCTCCTATTATAAGAGTATTAAAATGAATGGTTTGTATAATCTTGATCTTTCTTTCAACATACTTATAATTTAACGTACATATAGTAGTAGTAATTATAATGCCAAAAGGAGAAGGGAAAG
AAATTCTCCCTCCTACTTGCTATAACTTCTAGTACAAAGATTAAATAGATTACTACTACTACTGATCTGCTCCTATTATAAGAGTATTAAAATGAATGGTTTGTATAATCTTGATCTTTCTTTCAACATACTTATAATTTAACGTACATATAGTAGTAGTAATTATAATGCCAAAAGGAGAAGGGAAAG
AAATTCTCCCTCCTACTTGCTATAACTTCTAGTACAAAGATTAAATAGATTACTACTACTACTGATCTGCTCCTATTATAAGAGTATTAAAATGAATGGTTTGTATAATCTTGATCTTTCTTTCAACATACTTATAATTTAACGTACATATAGTAGTAGTAATTATAATGCCAAAAGGAGAAGGGAAAG
ORB     AT-rich region
The information of repeat sequences

Motif CTWCTAST

StartP-valueSite
101.64e-05AAATTCTCCCTCCTACTTGCTATAACT
534.35e-05AAATAGATTACTACTACTACTGATCTGC
677.23e-05TACTACTGATCTGCTCCTATTATAAGAG
261.35e-04CTTGCTATAACTTCTAGTACAAAGATTA
1534.68e-04CGTACATATAGTAGTAGTAATTATAATG

Motif GAAKGG

StartP-valueSite
1804.38e-05GCCAAAAGGAGAAGGGAAAG
941.56e-04GTATTAAAATGAATGGTTTGTATAAT

Motif ACRTAC

StartP-valueSite
1421.48e-04TTATAATTTAACGTACATATAGTAGT
1265.47e-04CTTTCTTTCAACATACTTATAATTTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010069 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010087 99.471 189 1 0 1 189 189 1 0.0 344
aORI10010066 99.471 189 1 0 1 189 189 1 0.0 344
aORI10010063 99.471 189 1 0 1 189 189 1 0.0 344
aORI10010268 98.942 189 2 0 1 189 189 1 0.0 339
aORI10010116 98.942 189 2 0 1 189 189 1 0.0 339
aORI10010113 98.942 189 2 0 1 189 189 1 0.0 339
aORI10010075 96.825 189 6 0 1 189 189 1 0.0 316
aORI10010072 96.296 189 7 0 1 189 189 1 0.0 311
aORI10010060 96.296 189 7 0 1 189 189 1 0.0 311
aORI10010360 78.646 192 33 7 1 189 2 188 1.73e-29 121
aORI10010338 78.646 192 33 7 1 189 2 188 1.73e-29 121
aORI10010335 78.646 192 33 7 1 189 2 188 1.73e-29 121
aORI10010332 78.646 192 33 7 1 189 2 188 1.73e-29 121
aORI10010111 78.646 192 33 7 1 189 2 188 1.73e-29 121
aORI10010012 78.646 192 33 7 1 189 2 188 1.73e-29 121