RefSeq NC_012622.1
DoriC accession number aORI10010066
OriC length 189 nt
OriC AT content 0.709
The location of oriC region 1256668..1256856 nt
Browse in NCBI
OriC map
OriC sequences
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTACGTTAAATTATAAGTACGTTGAAAGAAAGATCAAGATTATACAAACCATTCATTTTAATACTCTTATAATAGGAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTACGTTAAATTATAAGTACGTTGAAAGAAAGATCAAGATTATACAAACCATTCATTTTAATACTCTTATAATAGGAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTACGTTAAATTATAAGTACGTTGAAAGAAAGATCAAGATTATACAAACCATTCATTTTAATACTCTTATAATAGGAGCAGATCAGTAGTAGTAGTAATCTATTTAATCTTTGTACTAGAAGTTATAGCAAGTAGGAGGGAGAATTT
ORB     AT-rich region
The information of repeat sequences

Motif AGTAGNAG

StartP-valueSite
1731.64e-05AGTTATAGCAAGTAGGAGGGAGAATTT
1161.98e-05CTCTTATAATAGGAGCAGATCAGTAGTA
1276.99e-05GGAGCAGATCAGTAGTAGTAGTAATCTA
1571.37e-04TAATCTTTGTACTAGAAGTTATAGCAAG

Motif CCMTTC

StartP-valueSite
54.92e-05CTTTCCCTTCTCCTTTTGGC
911.71e-04ATTATACAAACCATTCATTTTAATAC

Motif GTACGT

StartP-valueSite
591.50e-04TAAATTATAAGTACGTTGAAAGAAAG
431.50e-04ACTACTATATGTACGTTAAATTATAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010087 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010066 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010063 100.0 189 0 0 1 189 1 189 0.0 350
aORI10010268 99.471 189 1 0 1 189 1 189 0.0 344
aORI10010116 99.471 189 1 0 1 189 1 189 0.0 344
aORI10010113 99.471 189 1 0 1 189 1 189 0.0 344
aORI10010069 99.471 189 1 0 1 189 189 1 0.0 344
aORI10010075 97.354 189 5 0 1 189 1 189 0.0 322
aORI10010072 96.825 189 6 0 1 189 1 189 0.0 316
aORI10010060 96.825 189 6 0 1 189 1 189 0.0 316
aORI10010360 78.238 193 32 9 1 189 188 2 8.07e-28 115
aORI10010338 78.238 193 32 9 1 189 188 2 8.07e-28 115
aORI10010335 78.238 193 32 9 1 189 188 2 8.07e-28 115
aORI10010332 78.238 193 32 9 1 189 188 2 8.07e-28 115
aORI10010111 78.238 193 32 9 1 189 188 2 8.07e-28 115
aORI10010012 78.238 193 32 9 1 189 188 2 8.07e-28 115