RefSeq NC_012622.1
DoriC accession number aORI10010067
OriC length 453 nt
OriC AT content 0.7329
The location of oriC region 385..837 nt
Browse in NCBI
OriC map
OriC sequences
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAACTTAAATATGTGTCAATGGTAATCAGACGTACGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACATTAGAAACATTAGAA
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAACTTAAATATGTGTCAATGGTAATCAGACGTACGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACATTAGAAACATTAGAA
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAACTTAAATATGTGTCAATGGTAATCAGACGTACGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACATTAGAAACATTAGAA
ORB     AT-rich region
The information of repeat sequences

Motif GGTAAWCWSRCS

StartP-valueSite
1794.70e-08TTTCGGATCTGGTAAACTCGCCTTTATTATAG
851.00e-07ATGTGTCAATGGTAATCAGACGTACGTTTATA

Motif GSMWACAG

StartP-valueSite
2416.24e-06TCGATTATTTGCCTACAGTACAAGTTGT
4238.80e-06TACAGTCATAGGAAACAGGTTTAACATT

Motif GYSGTC

StartP-valueSite
1193.71e-05GTCTACCTTAGCCGTCTCTTTTTCAA
3948.53e-05GATATAACCTGTGGTCTAGATATTAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010067 100.0 453 0 0 1 453 1 453 0.0 837
aORI10010070 99.338 453 3 0 1 453 1 453 0.0 821
aORI10010073 98.896 453 5 0 1 453 1 453 0.0 809
aORI10010061 98.896 453 5 0 1 453 1 453 0.0 809
aORI10010088 98.896 453 4 1 2 453 1 453 0.0 808
aORI10010064 98.896 453 4 1 2 453 1 453 0.0 808
aORI10010076 98.896 453 2 2 4 453 1 453 0.0 806
aORI10010333 86.534 453 60 1 1 453 386 837 0.0 497
aORI10010109 86.534 453 60 1 1 453 386 837 0.0 497
aORI10010011 86.534 453 60 1 1 453 386 837 0.0 497
aORI10010267 97.297 74 2 0 380 453 1 74 9.41e-31 126
aORI10010115 97.297 74 2 0 380 453 1 74 9.41e-31 126
aORI10010112 97.297 74 2 0 380 453 1 74 9.41e-31 126