RefSeq NC_017275.1
DoriC accession number aORI10010112
OriC length 74 nt
OriC AT content 0.7027
The location of oriC region 612..685 nt
Browse in NCBI
OriC map
OriC sequences
TATTGATATAACTTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
TATTGATATAACTTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
TATTGATATAACTTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
ORB     AT-rich region
The information of repeat sequences

Motif GATWTWAC

StartP-valueSite
57.19e-05TATTGATATAACTTGTGGTCTA
511.05e-04ATAGGAAACAGGTTTAACAGTAGAAACA
231.79e-04TTGTGGTCTAGATATTACCAATACAGTC

Motif TRYRGTC

StartP-valueSite
146.33e-05TGATATAACTTGTGGTCTAGATATTAC
341.04e-04ATATTACCAATACAGTCATAGGAAACA

Motif GAAACA

StartP-valueSite
635.69e-04TTTAACAGTAGAAACATTAGAA
455.69e-04ACAGTCATAGGAAACAGGTTTAACAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010267 100.0 74 0 0 1 74 1 74 5.81e-35 137
aORI10010115 100.0 74 0 0 1 74 1 74 5.81e-35 137
aORI10010112 100.0 74 0 0 1 74 1 74 5.81e-35 137
aORI10010088 98.649 74 1 0 1 74 380 453 2.7e-33 132
aORI10010076 98.649 74 1 0 1 74 380 453 2.7e-33 132
aORI10010073 98.649 74 1 0 1 74 380 453 2.7e-33 132
aORI10010070 98.649 74 1 0 1 74 380 453 2.7e-33 132
aORI10010064 98.649 74 1 0 1 74 380 453 2.7e-33 132
aORI10010061 98.649 74 1 0 1 74 380 453 2.7e-33 132
aORI10010067 97.297 74 2 0 1 74 380 453 1.26e-31 126