RefSeq NC_012588.1
DoriC accession number aORI10010061
OriC length 453 nt
OriC AT content 0.7307
The location of oriC region 384..836 nt
Browse in NCBI
OriC map
OriC sequences
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAACCTAAATATGTGCCAATGATAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAACCTAAATATGTGCCAATGATAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAACCTAAATATGTGCCAATGATAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
ORB     AT-rich region
The information of repeat sequences

Motif SGRAWCWGG

StartP-valueSite
1721.54e-06AGATATCTTTCGGATCTGGTAAACTCGCC
4231.87e-06TACAGTCATAGGAAACAGGTTTAACAGTA

Motif ACAKTASA

StartP-valueSite
4369.00e-06AACAGGTTTAACAGTAGAAACATTAGAA
2451.99e-05TTATTTGCCTACAGTACAAGTTGTTTCG
4455.03e-05AACAGTAGAAACATTAGAA

Motif AGMCGT

StartP-valueSite
1184.37e-05AGTCTACCTTAGCCGTCTCTTTTTCA
921.36e-04AATGATAATCAGACGTATGTTTATAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010073 100.0 453 0 0 1 453 1 453 0.0 837
aORI10010061 100.0 453 0 0 1 453 1 453 0.0 837
aORI10010070 99.117 453 4 0 1 453 1 453 0.0 815
aORI10010067 98.896 453 5 0 1 453 1 453 0.0 809
aORI10010088 98.675 453 5 1 2 453 1 453 0.0 802
aORI10010064 98.675 453 5 1 2 453 1 453 0.0 802
aORI10010076 98.675 453 3 2 4 453 1 453 0.0 800
aORI10010267 98.649 74 1 0 380 453 1 74 2.02e-32 132
aORI10010115 98.649 74 1 0 380 453 1 74 2.02e-32 132
aORI10010112 98.649 74 1 0 380 453 1 74 2.02e-32 132