RefSeq NC_021058.1
DoriC accession number aORI10010267
OriC length 80 nt
OriC AT content 0.3
The location of oriC region 767..847 nt
Browse in NCBI
OriC map
OriC sequences
TATTGATATAACTTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAAGTGAAT
TATTGATATAACTTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAAGTGAAT
TATTGATATAACTTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAAGTGAAT
ORB     AT-rich region
The information of repeat sequences

Motif GATWTWAC

StartP-valueSite
57.11e-05TATTGATATAACTTGTGGTCTA
511.79e-04ATAGGAAACAGGTTTAACAGTAGAAACA
231.79e-04TTGTGGTCTAGATATTACCAATACAGTC

Motif TRYRGTC

StartP-valueSite
146.59e-05TGATATAACTTGTGGTCTAGATATTAC
341.03e-04ATATTACCAATACAGTCATAGGAAACA

Motif GAAACA

StartP-valueSite
635.39e-04TTTAACAGTAGAAACATTAGAAGTGA
455.39e-04ACAGTCATAGGAAACAGGTTTAACAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010267 100.0 80 0 0 1 80 1 80 2.96e-38 148
aORI10010115 100.0 74 0 0 1 74 1 74 6.41e-35 137
aORI10010112 100.0 74 0 0 1 74 1 74 6.41e-35 137
aORI10010088 98.649 74 1 0 1 74 380 453 2.98e-33 132
aORI10010076 98.649 74 1 0 1 74 380 453 2.98e-33 132
aORI10010073 98.649 74 1 0 1 74 380 453 2.98e-33 132
aORI10010070 98.649 74 1 0 1 74 380 453 2.98e-33 132
aORI10010064 98.649 74 1 0 1 74 380 453 2.98e-33 132
aORI10010061 98.649 74 1 0 1 74 380 453 2.98e-33 132
aORI10010067 97.297 74 2 0 1 74 380 453 1.39e-31 126