Basic Information
| Assembly acc |
GCF_019456695.2
|
| Acc |
NZ_CP014860.2
|
| OriID | ORI97254502 |
| Organism | Mycobacterium shottsii |
| Topology | Circular |
| Lineage | Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium shottsii |
| Assembly Level | Complete |
| Literature linkage | Not linked |
| Chromosome size | 5956421 nt |
| Chromosome GC content | 65.53% |
| Indicator genes |
|
| OriC location |
|
| OriC Length |
|
| OriC AT Content |
|
Comparative Sequence Support
Recurrence category
Cross-taxon
Sequence cluster
BC-OH000337
Cluster members
26
Distinct accessions
26
Species / genera
5 / 1
Literature-linked members
0
Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.
Top 10 most similar Ori IDs
| Rank | Ori ID | Accession | Organism | Identity | Reciprocal coverage | Literature linkage |
|---|---|---|---|---|---|---|
| 1 | ORI97207394 |
NZ_AP022572.1 |
Mycobacterium shottsii | 100.00% | 100.00% | Not linked |
| 2 | ORI97207870 |
NZ_CP014860.1 |
Mycobacterium shottsii | 100.00% | 100.00% | Not linked |
| 3 | ORI97208068 |
NZ_CP024190.1 |
Mycobacterium marinum | 98.70% | 100.00% | Not linked |
| 4 | ORI97262397 |
NZ_CP092981.1 |
Mycobacterium marinum | 98.70% | 100.00% | Not linked |
| 5 | ORI97277670 |
NZ_CP129323.1 |
Mycobacterium marinum | 98.70% | 100.00% | Not linked |
| 6 | ORI97209107 |
NZ_CP058277.1 |
Mycobacterium marinum | 97.90% | 100.00% | Not linked |
| 7 | ORI97209660 |
NZ_CP083741.1 |
Mycobacterium ulcerans | 97.70% | 100.00% | Not linked |
| 8 | ORI97227661 |
NC_020133.1 |
Mycobacterium liflandii 128FXT | 97.70% | 100.00% | Not linked |
| 9 | ORI97249165 |
NZ_AP018410.1 |
Mycobacterium pseudoshottsii JCM 15466 | 97.70% | 100.00% | Not linked |
| 10 | ORI97252346 |
NZ_CP155055.1 |
Mycobacterium pseudoshottsii | 97.70% | 100.00% | Not linked |
The interactive Z-curves rotated at the maximum of the GC disparity.
RIP Sequence-Similarity Network
Replication Initiation Protein Information
| Gene Start | Gene End | Translation |
|---|---|---|
| 25 | 1557 | MTNDPDSGFAAVWNAVVAEL... |
OriC Visualization
| OriC map | |
| OriC sequences |
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaaTCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnan
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site |
BLAST Results
| Subject ID | Identity (%) | Length | Mismatches | Gaps | Query Start | Query End | Subject Start | Subject End | E-value | Bit Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ORI92310402 | 97.60% | 541 | 11 | 2 | 1 | 540 | 1 | 540 | 0.0 | 926.0 |
| ORI60010254 | 97.22% | 540 | 13 | 2 | 1 | 540 | 1 | 538 | 0.0 | 913.0 |
Found 2 BLAST matches