Basic Information

Assembly acc GCF_010728525.1
Acc NZ_AP022572.1
OriID ORI97207394
Organism Mycobacterium shottsii
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium shottsii
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5973149 nt
Chromosome GC content 65.53%
Indicator genes
  • rpmH      641557... 641700nt
  • dnaA      643670... 645202nt
  • dnaN      645743... 646951nt
  • hemB      2482973... 2483956nt
  • hemE      4963804... 4964865nt
OriC location
  • 645203 ... 645742 nt
OriC Length
  • 540 nt
OriC AT Content
  • 0.4556

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000337
Cluster members 26
Distinct accessions 26
Species / genera 5 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207870 NZ_CP014860.1 Mycobacterium shottsii 100.00% 100.00% Not linked
2 ORI97254502 NZ_CP014860.2 Mycobacterium shottsii 100.00% 100.00% Not linked
3 ORI97208068 NZ_CP024190.1 Mycobacterium marinum 98.70% 100.00% Not linked
4 ORI97262397 NZ_CP092981.1 Mycobacterium marinum 98.70% 100.00% Not linked
5 ORI97277670 NZ_CP129323.1 Mycobacterium marinum 98.70% 100.00% Not linked
6 ORI97209107 NZ_CP058277.1 Mycobacterium marinum 97.90% 100.00% Not linked
7 ORI97209660 NZ_CP083741.1 Mycobacterium ulcerans 97.70% 100.00% Not linked
8 ORI97227661 NC_020133.1 Mycobacterium liflandii 128FXT 97.70% 100.00% Not linked
9 ORI97249165 NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466 97.70% 100.00% Not linked
10 ORI97252346 NZ_CP155055.1 Mycobacterium pseudoshottsii 97.70% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_AP022572.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
643670 645202 MTNDPDSGFAAVWNAVVAEL...

OriC Visualization

OriC map
OriC sequences
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaaTCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnan
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGAACACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGACGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCCTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCAGGCTTAAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI92310402 97.60% 541 11 2 1 540 1 540 0.0 926.0
ORI60010254 97.22% 540 13 2 1 540 1 538 0.0 913.0
Found 2 BLAST matches
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