Basic Information

Assembly acc GCF_003391395.1
Acc NZ_CP024190.1
OriID ORI97208068
Organism Mycobacterium marinum
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium marinum
Assembly Level Complete
Literature linkage Not linked
Chromosome size 6453310 nt
Chromosome GC content 65.72%
Indicator genes
  • dnaA      25... 1557nt
  • dnaN      2098... 3306nt
  • hemB      947460... 948443nt
  • hemE      2318757... 2319818nt
  • dnaN      4670104... 4671246nt
  • rpmH      6452661... 6452804nt
OriC location
  • 1558 ... 2097 nt
OriC Length
  • 540 nt
OriC AT Content
  • 0.4519

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000337
Cluster members 26
Distinct accessions 26
Species / genera 5 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97277670 NZ_CP129323.1 Mycobacterium marinum 100.00% 100.00% Not linked
2 ORI97262397 NZ_CP092981.1 Mycobacterium marinum 99.20% 100.00% Not linked
3 ORI97207394 NZ_AP022572.1 Mycobacterium shottsii 98.70% 100.00% Not linked
4 ORI97207870 NZ_CP014860.1 Mycobacterium shottsii 98.70% 100.00% Not linked
5 ORI97254502 NZ_CP014860.2 Mycobacterium shottsii 98.70% 100.00% Not linked
6 ORI97209107 NZ_CP058277.1 Mycobacterium marinum 98.50% 100.00% Not linked
7 ORI97209660 NZ_CP083741.1 Mycobacterium ulcerans 98.30% 100.00% Not linked
8 ORI97227661 NC_020133.1 Mycobacterium liflandii 128FXT 98.30% 100.00% Not linked
9 ORI97249165 NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466 98.30% 100.00% Not linked
10 ORI97252346 NZ_CP155055.1 Mycobacterium pseudoshottsii 98.30% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP024190.1
Open full view

Replication Initiation Protein Information

Gene Start Gene End Translation
25 1557 MTNDPGSGFAAVWNAVVAEL...

OriC Visualization

OriC map
OriC sequences
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaaTCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnan
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCGGCTCCAGTAATTTCTGCAAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACACCGGTGTGTGTAGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTTCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTACACAGCGCCGCATCGCAGCGCGTGTCGGCTGACTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTGGTGTAACTACACGCCACTGACGTACGAGGCGGTCAGTCCCACCTGCCGGCGACAAAGTCGGCTCATGGATTTACGGATTTTGAACTCACTGTTAGGTGAAGGGACGCAdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI92310402 98.15% 541 8 2 1 540 1 540 0.0 942.0
ORI60010254 97.78% 540 10 2 1 540 1 538 0.0 929.0
Found 2 BLAST matches
Return to browse page