Basic Information

Assembly acc GCF_002007825.1
Acc NZ_CP019865.1
OriID ORI97016557
Organism Dehalococcoides mccartyi
Topology Circular
Lineage Bacteria ; Bacillati ; Chloroflexota ; Dehalococcoidia ; Dehalococcoidales ; Dehalococcoidaceae ; Dehalococcoides ; Dehalococcoides mccartyi
Assembly Level Complete
Literature linkage Not linked
Chromosome size 1329198 nt
Chromosome GC content 49.14%
Indicator genes
  • dnaA      261... 1598nt
  • rpmH      868851... 868952nt
  • dnaN      1035825... 1036961nt
OriC location
  • 1599 ... 1925 nt
OriC Length
  • 327 nt
OriC AT Content
  • 0.6728

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000573
Cluster members 14
Distinct accessions 14
Species / genera 3 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97016558 NZ_CP019866.1 Dehalococcoides mccartyi 100.00% 100.00% Not linked
2 ORI97016135 NZ_CP006950.1 Dehalococcoides mccartyi CG4 97.80% 100.00% Not linked
3 ORI97016113 NZ_AP017649.1 Dehalococcoides mccartyi 97.50% 100.00% Not linked
4 ORI97268826 NZ_CP141531.1 Dehalococcoides mccartyi 97.50% 99.40% Not linked
5 ORI97276114 NZ_CP171266.1 Dehalococcoides sp. THU4 97.50% 99.40% Not linked
6 ORI10010023 NC_002936.3 Dehalococcoides mccartyi 195 96.90% 100.00% Not linked
7 ORI97031253 NZ_CP080651.1 Dehalococcoides mccartyi 94.10% 100.00% Not linked
8 ORI97016110 NZ_AP014722.1 Dehalococcoides sp. UCH007 93.80% 100.00% Not linked
9 ORI97010658 NC_022964.1 Dehalococcoides mccartyi GY50 92.90% 77.00% Not linked
10 ORI10010158 NC_007356.1 Dehalococcoides mccartyi CBDB1 83.10% 80.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP019865.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
261 1598 MSVRPAQELWETALGEIELQ...

OriC Visualization

OriC map
OriC sequences
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaaTATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobge
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
dnaATATTAGCCCTTTTCGCCGCACCGCTTTTCCTTATCCTTATATTTTTCTTTATTTTCATTCTGCCAGCAGGGTGCTTTTGCCGGTTTTTTCTATTCGTTTTAGACAGGCTTTCTATAACTTTATTATATTTTTCGATAACCGGGCTGAATTTTCGATAACTTTGCAGATACTTTGCTTTGAAAATAAGGCTGGAGGACAGGAATAGCGATTTTACTCGTAAAGCCTTATTATTAGTATTTCTGATATACTTAAAAAATAAACCAGTTAAAGTTAATGGGATTTCGACAACTCAAGAATTAGATAACTTTTTAGATAAGGTGTTTTTATobgE
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI10010023 96.94% 327 8 2 1 327 1 325 0.0 547.0
ORI93010614 85.83% 254 31 5 73 324 77 327 0.0 265.0
ORI90010302 84.11% 258 36 5 69 324 72 326 0.0 244.0
ORI10010158 84.11% 258 36 5 69 324 72 326 0.0 244.0
ORI93010642 83.72% 258 38 4 69 324 72 327 0.0 241.0
Found 5 BLAST matches
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