RefSeq NC_004930
DoriC accession number pORI00000249
OriC length 357 nt
OriC AT content 0.5882
The location of oriC region 1234..1590 nt
Browse in NCBI
OriC map
OriC sequences
ATGTTTGCCACGTGTCAAAGTTTTATAATCAGCTTTTCAAGCTGACTGCTCCTGTCATCGAGCAGACCGATGAGGAAAACAAAAAGAGAGCTAAACAAAAAATGTTTAGCTCTCTTTTTGTTTTGAATAGTCCTAGAACGTCATATTTTGCGTTTTAAGAGCTTTTAGCGTTTATTTCGTTTAGTTGTCGGCATAATCGTTAAAACAGGCGTTATCGTAGCGGAAAAGCCCTTGAGCGTAGCGTGGCTTTGCAGCGAAGATGTTGTCTGTTAGATTATGAAAGCCGATAACTGAATGAAATAATAAGCGCAGCGCCCTTCTATTTCGGTTGGAGGAGGCTCAAGGGAGTTTGAGGGA
ATGTTTGCCACGTGTCAAAGTTTTATAATCAGCTTTTCAAGCTGACTGCTCCTGTCATCGAGCAGACCGATGAGGAAAACAAAAAGAGAGCTAAACAAAAAATGTTTAGCTCTCTTTTTGTTTTGAATAGTCCTAGAACGTCATATTTTGCGTTTTAAGAGCTTTTAGCGTTTATTTCGTTTAGTTGTCGGCATAATCGTTAAAACAGGCGTTATCGTAGCGGAAAAGCCCTTGAGCGTAGCGTGGCTTTGCAGCGAAGATGTTGTCTGTTAGATTATGAAAGCCGATAACTGAATGAAATAATAAGCGCAGCGCCCTTCTATTTCGGTTGGAGGAGGCTCAAGGGAGTTTGAGGGA
AT-rich region
The information of repeat sequences

Motif CGYAGCG

StartP-valueSite
3081.96e-05AAATAATAAGCGCAGCGCCCTTCTATT
2375.53e-05AGCCCTTGAGCGTAGCGTGGCTTTGCA
2165.53e-05CAGGCGTTATCGTAGCGGAAAAGCCCT
2509.10e-05AGCGTGGCTTTGCAGCGAAGATGTTGT

Motif CRAGCWGACYG

StartP-valueSite
596.35e-08CTCCTGTCATCGAGCAGACCGATGAGGAAAA
388.05e-07ATCAGCTTTTCAAGCTGACTGCTCCTGTCAT

Motif GAGSWAAACAAAAA

StartP-valueSite
881.06e-08AACAAAAAGAGAGCTAAACAAAAAATGTTTAGCT
721.78e-08GCAGACCGATGAGGAAAACAAAAAGAGAGCTAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000249 100.0 357 0 0 1 357 1 357 0.0 660
pORI00000026 96.635 208 5 2 151 357 810 1016 0.0 344
pORI00000026 93.893 131 7 1 29 159 611 740 0.0 196
pORI00000252 94.634 205 11 0 153 357 509 713 0.0 318
pORI00000003 92.788 208 14 1 151 357 303 510 0.0 300
pORI00000375 95.714 140 4 2 29 167 805 667 0.0 224