RefSeq NC_018594.1
Accession number NC_018594.1
DoriC accession number ORI96010298
OriC length 167 nt
OriC AT content 0.760479
The location of oriC region 1548..1714 nt
Browse in NCBI
OriC map
OriC sequences
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaaTTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnan
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaATTTGTGGATAACTTTTAGTTTTTTATCTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCTAAAAAACTTGATATGACTTGTTTAAAGGCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCTTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CACAGA

StartP-valueSite
1107.07e-05CCACAGATTTCACAGACTCTATTATT
1017.07e-05GGCTGTTTTCCACAGATTTCACAGAC

Motif GGAKAA

StartP-valueSite
1593.28e-05AATAAATAAAGGAGAATCC
61.76e-04TTTGTGGATAACTTTTAGTTT

Motif AMARGC

StartP-valueSite
887.00e-05TGACTTGTTTAAAGGCTGTTTTCCAC
581.41e-04CATTTTTTAAACAAGCTAAAAAACTT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96010298 100.0 167 0 0 1 167 1 167 0.0 309
ORI96010202 98.639 147 1 1 21 167 13 158 0.0 259
ORI96010165 98.639 147 1 1 21 167 13 158 0.0 259
ORI96010163 98.639 147 1 1 21 167 13 158 0.0 259
ORI96010161 98.639 147 1 1 21 167 13 158 0.0 259
ORI94010740 98.639 147 1 1 21 167 13 158 0.0 259
ORI94010738 98.639 147 1 1 21 167 13 158 0.0 259
ORI93010692 98.639 147 1 1 21 167 13 158 0.0 259
ORI92710508 98.639 147 1 1 21 167 13 158 0.0 259
ORI92710506 98.639 147 1 1 21 167 13 158 0.0 259
ORI92710502 98.639 147 1 1 21 167 13 158 0.0 259
ORI92710488 98.639 147 1 1 21 167 13 158 0.0 259
ORI92510442 98.639 147 1 1 21 167 13 158 0.0 259
ORI92310398 98.639 147 1 1 21 167 13 158 0.0 259
ORI92310375 98.639 147 1 1 21 167 13 158 0.0 259
ORI10010040 98.639 147 1 1 21 167 13 158 0.0 259
ORI96010304 97.959 147 2 1 21 167 13 158 0.0 254
ORI92710504 97.959 147 2 1 21 167 13 158 0.0 254
ORI40010239 97.959 147 2 1 21 167 13 158 0.0 254
ORI10010044 97.959 147 2 1 21 167 13 158 0.0 254
ORI94010900 95.918 147 5 1 21 167 13 158 0.0 237
ORI93010638 95.238 147 6 1 21 167 13 158 0.0 231