RefSeq NC_013853.1
Accession number NC_013853.1
DoriC accession number ORI93010638
OriC length 158 nt
OriC AT content 0.746835
The location of oriC region 1363..1520 nt
Browse in NCBI
OriC map
OriC sequences
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaaCTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnan
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaACTTGTGGATAACTTTTACTTTTTTATCTTTTTTATCCACATTTTTTAAACAAGCGAAAGAACTTGATATTACTTGTTTAAAATCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CACAGA

StartP-valueSite
1019.54e-05CCACAGATTTCACAGACTCTATTATT
929.54e-05ATCTGTTTTCCACAGATTTCACAGAC

Motif ARGMGAA

StartP-valueSite
1491.47e-05AAATAAATAAAGGAGAATCC
513.23e-05TTTTTTAAACAAGCGAAAGAACTTGAT

Motif CTTGTKKA

StartP-valueSite
12.98e-06.CTTGTGGATAACTTTTAC
728.67e-05CTTGATATTACTTGTTTAAAATCTGTTT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI93010638 100.0 158 0 0 1 158 1 158 0.0 292
ORI94010900 96.178 157 6 0 2 158 2 158 0.0 257
ORI96010202 95.541 157 7 0 2 158 2 158 0.0 252
ORI96010165 95.541 157 7 0 2 158 2 158 0.0 252
ORI96010163 95.541 157 7 0 2 158 2 158 0.0 252
ORI96010161 95.541 157 7 0 2 158 2 158 0.0 252
ORI94010740 95.541 157 7 0 2 158 2 158 0.0 252
ORI94010738 95.541 157 7 0 2 158 2 158 0.0 252
ORI93010692 95.541 157 7 0 2 158 2 158 0.0 252
ORI92710508 95.541 157 7 0 2 158 2 158 0.0 252
ORI92710506 95.541 157 7 0 2 158 2 158 0.0 252
ORI92710502 95.541 157 7 0 2 158 2 158 0.0 252
ORI92710488 95.541 157 7 0 2 158 2 158 0.0 252
ORI92510442 95.541 157 7 0 2 158 2 158 0.0 252
ORI92310398 95.541 157 7 0 2 158 2 158 0.0 252
ORI92310375 95.541 157 7 0 2 158 2 158 0.0 252
ORI10010040 95.541 157 7 0 2 158 2 158 0.0 252
ORI96010304 94.904 157 8 0 2 158 2 158 0.0 246
ORI92710504 94.904 157 8 0 2 158 2 158 0.0 246
ORI40010239 94.904 157 8 0 2 158 2 158 0.0 246
ORI10010044 94.904 157 8 0 2 158 2 158 0.0 246
ORI96010298 95.238 147 6 1 13 158 21 167 0.0 231