RefSeq NC_015875.1
Accession number NC_015875.1
DoriC accession number ORI94010900
OriC length 158 nt
OriC AT content 0.734177
The location of oriC region 1363..1520 nt
Browse in NCBI
OriC map
OriC sequences
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaaGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnan
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
dnaAGTTGTGGATAACTTTTACTTTATTATCTTTTTTATCCACATTTTTTAAACAAGCCCAAAAACTTGATATGACTTGTTTAAAGTCTGTTTTCCACAGATTTCACAGACTCTATTATTACTATTATCCTTCTAATACTAAAAATAAATAAAGGAGAATCCdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CACAGA

StartP-valueSite
1011.09e-04CCACAGATTTCACAGACTCTATTATT
921.09e-04GTCTGTTTTCCACAGATTTCACAGAC

Motif GGAKAA

StartP-valueSite
1503.56e-05AATAAATAAAGGAGAATCC
61.78e-04GTTGTGGATAACTTTTACTTT

Motif RACTTG

StartP-valueSite
708.77e-05AACTTGATATGACTTGTTTAAAGTCT
603.83e-04CAAGCCCAAAAACTTGATATGACTTG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94010900 100.0 158 0 0 1 158 1 158 0.0 292
ORI96010202 96.178 157 6 0 2 158 2 158 0.0 257
ORI96010165 96.178 157 6 0 2 158 2 158 0.0 257
ORI96010163 96.178 157 6 0 2 158 2 158 0.0 257
ORI96010161 96.178 157 6 0 2 158 2 158 0.0 257
ORI94010740 96.178 157 6 0 2 158 2 158 0.0 257
ORI94010738 96.178 157 6 0 2 158 2 158 0.0 257
ORI93010692 96.178 157 6 0 2 158 2 158 0.0 257
ORI93010638 96.178 157 6 0 2 158 2 158 0.0 257
ORI92710508 96.178 157 6 0 2 158 2 158 0.0 257
ORI92710506 96.178 157 6 0 2 158 2 158 0.0 257
ORI92710502 96.178 157 6 0 2 158 2 158 0.0 257
ORI92710488 96.178 157 6 0 2 158 2 158 0.0 257
ORI92510442 96.178 157 6 0 2 158 2 158 0.0 257
ORI92310398 96.178 157 6 0 2 158 2 158 0.0 257
ORI92310375 96.178 157 6 0 2 158 2 158 0.0 257
ORI10010040 96.178 157 6 0 2 158 2 158 0.0 257
ORI96010304 95.541 157 7 0 2 158 2 158 0.0 252
ORI92710504 95.541 157 7 0 2 158 2 158 0.0 252
ORI40010239 95.541 157 7 0 2 158 2 158 0.0 252
ORI10010044 95.541 157 7 0 2 158 2 158 0.0 252
ORI96010298 95.918 147 5 1 13 158 21 167 0.0 237