RefSeq NC_016816.1
Accession number NC_016816.1
DoriC accession number ORI95030438
OriC length 432 nt
OriC AT content 0.56713
The location of oriC region 77374..77805 nt
Browse in NCBI
OriC map
OriC sequences
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidaGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioc
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
gidAGAAGTGGTACCTCGTTGATGAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGATTCTACTGAAATTATGGCTGAGGTGAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAGATCTTAATTCTTTGTATGATCTTTCTGTTAGATCTCTTATTAGGATCGCCATCTCTTGTGGATATCTGCGAAAAGCACAGGATAAACAAGTGCGTAGCGAGGATCGTTACCTGTTAATGATCGGTGATCCTGATCCGTATAAGCTGGGATCAAAAGAGGACTTTATCCACAGCTCATAAAGTAAACTCCAGTTGTTCTTTGGATAACTACCGGTTATACGCAACTAAACAGGGTAGTTATCCACAAAATAAAAGACCAGATCCGGGGAAAAACAGTATCTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCTGACCGGCmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GGATCGTYATSTNTT

StartP-valueSite
1554.36e-09TCTCTTATTAGGATCGCCATCTCTTGTGGATATCT
2139.12e-08TGCGTAGCGAGGATCGTTACCTGTTAATGATCGGT
885.36e-07GAAAGCAGCGGGATCGACAGGTATTAAAAGAAAAG
4016.20e-07CTTCTGCTGGGGATCGTCGTGATTTCCCGATCCCT
307.89e-07GAATAGTCAGAGATCGTTCTCTCTGGGCCGTGGAT

Motif CCHGATCC

StartP-valueSite
4165.41e-06GTCGTGATTTCCCGATCCCTGACCGGC
3682.12e-05AAATAAAAGACCAGATCCGGGGAAAAAC
2412.12e-05GATCGGTGATCCTGATCCGTATAAGCTG

Motif TTATMCRCA

StartP-valueSite
3493.85e-06AACAGGGTAGTTATCCACAAAATAAAAGA
2753.85e-06AAAGAGGACTTTATCCACAGCTCATAAAG
3261.74e-05TAACTACCGGTTATACGCAACTAAACAGG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI95030438 100.0 432 0 0 1 432 1 432 0.0 798
ORI96000394 99.537 432 2 0 1 432 1 432 0.0 787
ORI96000392 98.843 432 5 0 1 432 432 1 0.0 771
ORI93020114 98.701 231 3 0 202 432 231 1 0.0 411
ORI94030322 81.352 429 69 11 1 424 432 10 0.0 339