RefSeq NC_014965.1
Accession number NC_014965.1
DoriC accession number ORI94030347
OriC length 468 nt
OriC AT content 0.623932
The location of oriC region 3193881..116 nt
Browse in NCBI
OriC map
OriC sequences
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
miocTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgida
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
mioCTGCCTATTGCGGGGGAAGCACTCCCTCGCTTTTCCCTTCTGTGAATAACCTTTCTACAAATCCCATCATCAATTCGACGAAAAATCACACGATCCATCTGTGGATAAAATAGAGAAGATCCAGTGTTTTTCCTATAGTTATCCAAGTAATAACTTTTACACTTCGCGCCCCCTGTGTATAACCACCCATTTTGATCCCAGGTAATCCTTGTGTAGATCAAATCATGATCACACGATATGATCCAAATAAGATCCATGATCTTGTTGATCATTTTTAACTTATCCACAGATCACCTCGATCCTAATAATAGATCCAATAAAAGATCATATATAAAGATCTTTATATATATTTAGTGGGATGATCTCGTGATTCGCGAGACGAAAACAATTTTCACTCATCCACAAAAGAAGGTAGAATATCGCTCTTTTTCTCTCACTGTTGAATCCTTTGAATACCTGAGGTCAGTTCgidA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CCHTCTGTGDATAA

StartP-valueSite
941.19e-08ATCACACGATCCATCTGTGGATAAAATAGAGAAG
353.97e-08CTCGCTTTTCCCTTCTGTGAATAACCTTTCTACA
1681.76e-07ACACTTCGCGCCCCCTGTGTATAACCACCCATTT
2063.05e-07CCCAGGTAATCCTTGTGTAGATCAAATCATGATC

Motif GBGRGAHG

StartP-valueSite
112.75e-06TGCCTATTGCGGGGGAAGCACTCCCTCG
3531.29e-05TATATATTTAGTGGGATGATCTCGTGAT
3732.09e-05CTCGTGATTCGCGAGACGAAAACAATTT

Motif GATCCA

StartP-valueSite
3102.31e-04CCTAATAATAGATCCAATAAAAGATC
2502.31e-04ATCCAAATAAGATCCATGATCTTGTT
2392.31e-04CACACGATATGATCCAAATAAGATCC
1172.31e-04AAATAGAGAAGATCCAGTGTTTTTCC
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94030347 100.0 468 0 0 1 468 1 468 0.0 865
ORI10020017 99.145 468 4 0 1 468 468 1 0.0 843
ORI10020013 99.145 468 4 0 1 468 1 468 0.0 843
ORI92220051 79.747 395 66 12 80 468 387 1 0.0 274
ORI93020108 85.714 259 28 9 98 352 109 362 0.0 265