RefSeq NC_006396.1
DoriC accession number aORI10010127
OriC length 944 nt
OriC AT content 0.465
The location of oriC region 2413087..2414030 nt
Browse in NCBI
OriC map
OriC sequences
CCTATCCTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTCTGCCCGTAAAAGATAGGCGAATTCACTTAAGCCTACGTCAGACATGAGTTTTCTTTTTGACATGAGGGAGCATATCATGGCATAGACCAGCGTGCTGGCGTTGCTACGGGTGTGGAACGGTTGGCGGGGAGCTGTTCGGGTGGAGTCCGGTCATCCGAAACCAGACAATTTAGATTTGGGTTCCCCATCCTAGCCCCCCACCCCTTCGTTTCAAGTGGAACGCCATGCACCCCTGGGGAGGGGTGGGAGAATCGTCGGTCGAATCGGGAGTGCACCAGTTGTTCAGAGCAGCGCGATTCGTGACTTCACTAGCTAGAGCGGCCTAGACACTAGAAAACTGTACACTAACCCCTACTAGCTATTTGTTTTATCTAGTACGGCTTTGGTTTATATGATATCGTATTAAGTCTTTCCCCTTTCTAGAAGACACCATCGGCCTCCCCACCCCCTCCCCCCGGGCCTGTTTCCTGTTCCACCGGAAACGAAGGGGTGGGGGGGTTGGCCTGTTGCAGTCGGTTTCCGCTGCAAGTGCCGGTTTATGATGCACCCTGCGCATATTCATACAGCGTACTCGCTCTTGGAACTGCGCCACCGCTCCCGTTCCTATCCAATCACTCTCCCGCTGCATCATGTCCATCCGACCTCGGTGAGACTGAAGCTATAGTCCTCTTTAGGACAACAGTACCCACCCGACAGAAACAATCAATATAACAACATATATGTTTCATGGGTGGTGTACCGAAATATTTAATATCGATTCACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCACTAACAACGGTACTGACGCACTCCTCGCTCCCTCTGTTCCGGTGTCTCCAACTCGCTCCACACGAAACGAAGGGGACCCTCTTGATCGACT
CCTATCCTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTCTGCCCGTAAAAGATAGGCGAATTCACTTAAGCCTACGTCAGACATGAGTTTTCTTTTTGACATGAGGGAGCATATCATGGCATAGACCAGCGTGCTGGCGTTGCTACGGGTGTGGAACGGTTGGCGGGGAGCTGTTCGGGTGGAGTCCGGTCATCCGAAACCAGACAATTTAGATTTGGGTTCCCCATCCTAGCCCCCCACCCCTTCGTTTCAAGTGGAACGCCATGCACCCCTGGGGAGGGGTGGGAGAATCGTCGGTCGAATCGGGAGTGCACCAGTTGTTCAGAGCAGCGCGATTCGTGACTTCACTAGCTAGAGCGGCCTAGACACTAGAAAACTGTACACTAACCCCTACTAGCTATTTGTTTTATCTAGTACGGCTTTGGTTTATATGATATCGTATTAAGTCTTTCCCCTTTCTAGAAGACACCATCGGCCTCCCCACCCCCTCCCCCCGGGCCTGTTTCCTGTTCCACCGGAAACGAAGGGGTGGGGGGGTTGGCCTGTTGCAGTCGGTTTCCGCTGCAAGTGCCGGTTTATGATGCACCCTGCGCATATTCATACAGCGTACTCGCTCTTGGAACTGCGCCACCGCTCCCGTTCCTATCCAATCACTCTCCCGCTGCATCATGTCCATCCGACCTCGGTGAGACTGAAGCTATAGTCCTCTTTAGGACAACAGTACCCACCCGACAGAAACAATCAATATAACAACATATATGTTTCATGGGTGGTGTACCGAAATATTTAATATCGATTCACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCACTAACAACGGTACTGACGCACTCCTCGCTCCCTCTGTTCCGGTGTCTCCAACTCGCTCCACACGAAACGAAGGGGACCCTCTTGATCGACT
CCTATCCTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTCTGCCCGTAAAAGATAGGCGAATTCACTTAAGCCTACGTCAGACATGAGTTTTCTTTTTGACATGAGGGAGCATATCATGGCATAGACCAGCGTGCTGGCGTTGCTACGGGTGTGGAACGGTTGGCGGGGAGCTGTTCGGGTGGAGTCCGGTCATCCGAAACCAGACAATTTAGATTTGGGTTCCCCATCCTAGCCCCCCACCCCTTCGTTTCAAGTGGAACGCCATGCACCCCTGGGGAGGGGTGGGAGAATCGTCGGTCGAATCGGGAGTGCACCAGTTGTTCAGAGCAGCGCGATTCGTGACTTCACTAGCTAGAGCGGCCTAGACACTAGAAAACTGTACACTAACCCCTACTAGCTATTTGTTTTATCTAGTACGGCTTTGGTTTATATGATATCGTATTAAGTCTTTCCCCTTTCTAGAAGACACCATCGGCCTCCCCACCCCCTCCCCCCGGGCCTGTTTCCTGTTCCACCGGAAACGAAGGGGTGGGGGGGTTGGCCTGTTGCAGTCGGTTTCCGCTGCAAGTGCCGGTTTATGATGCACCCTGCGCATATTCATACAGCGTACTCGCTCTTGGAACTGCGCCACCGCTCCCGTTCCTATCCAATCACTCTCCCGCTGCATCATGTCCATCCGACCTCGGTGAGACTGAAGCTATAGTCCTCTTTAGGACAACAGTACCCACCCGACAGAAACAATCAATATAACAACATATATGTTTCATGGGTGGTGTACCGAAATATTTAATATCGATTCACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCACTAACAACGGTACTGACGCACTCCTCGCTCCCTCTGTTCCGGTGTCTCCAACTCGCTCCACACGAAACGAAGGGGACCCTCTTGATCGACT
ORB     AT-rich region
The information of repeat sequences

Motif TBCAWSTBGHTCVACHBGAAVCVMHGGGGAGSG

StartP-valueSite
9007.75e-14TTCCGGTGTCTCCAACTCGCTCCACACGAAACGAAGGGGACCCTCTTGATCGA
8111.03e-13CACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCA
5032.86e-13CCCCCGGGCCTGTTTCCTGTTCCACCGGAAACGAAGGGGTGGGGGGGTTGGCC
2517.84e-13ACCCCTTCGTTTCAAGTGGAACGCCATGCACCCCTGGGGAGGGGTGGGAGAAT

Motif TCTWTATGACAHCAK

StartP-valueSite
7094.60e-08GCTATAGTCCTCTTTAGGACAACAGTACCCACCCG
7448.23e-08ACAGAAACAATCAATATAACAACATATATGTTTCA
4602.24e-07CTTTCCCCTTTCTAGAAGACACCATCGGCCTCCCC
934.07e-07ACATGAGTTTTCTTTTTGACATGAGGGAGCATATC
4285.09e-07ACGGCTTTGGTTTATATGATATCGTATTAAGTCTT

Motif CGGGWGTVGWCCGGT

StartP-valueSite
1481.27e-08GGCGTTGCTACGGGTGTGGAACGGTTGGCGGGGAG
1786.32e-08GGGAGCTGTTCGGGTGGAGTCCGGTCATCCGAAAC
3068.60e-08TCGGTCGAATCGGGAGTGCACCAGTTGTTCAGAGC
179.35e-08CTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010127 100.0 944 0 0 1 944 1 944 0.0 1744
aORI10010293 82.788 947 131 25 1 935 1 927 0.0 817
aORI10010246 82.682 947 134 23 1 935 1 929 0.0 813
aORI10010185 82.682 947 134 23 1 935 1 929 0.0 813
aORI10010313 82.353 952 138 22 1 944 1 930 0.0 800
aORI10010201 100.0 30 0 0 233 262 498 527 2.66e-09 57
aORI10010149 87.5 48 4 2 235 280 1021 974 9.57e-09 55