RefSeq NC_015948.1
DoriC accession number aORI10010185
OriC length 934 nt
OriC AT content 0.4465
The location of oriC region 2994338..2995271 nt
Browse in NCBI
OriC map
OriC sequences
CCTATCCTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTCTGCCCGTAAAAGATAGGCGAATTCACTTAAGCCTACGTCAGACATTAGTCCTTTTTCTGACATGGGGAGGCATAGCACAGATCAGCGTGTGCGCGTTTCCGCGGATGCAATCGGGACGGGAACTGTTCGGGTGGAGTCCGGTCATCCGAAACCCAGCGATTCGGATTAGGGGTGGACCATCCTAGCCCCCCACCCCTTTGTTTCAGGTGGAACGACAGACATCCCTGGGGAGGGGGTGGAGAATTACCGATCAAATCGGGAGCGGACCAGCTGTTCAAATCGGCGCGACTCGCCATACCGCTAGTTAGAACGGCCTAGACACTAGAAAACTGTATACTACCCTCTACTAGGGATTTGTTTTATCTAGTGCGGCTTTGGTTTATGAGGTAGTGTATTAAACCTTTCCCCTTACTAGAGGACATTTTCGTCACCCTCACCCCCTCCCCCCGGGCCTGTTTCCCGTTCCACCGGAAACGGAGGGGTGGGGGGGGTTGGCCCGTTACGGTCGCTTTGTCCTACAGGTCCCGTCCTGCCGTGGTACCACCACTCGTGTTCACACAGCGTACCAGCTCCCGGAACCACTCCATGGCTCCCCTTCCCCTCCACTCATACCCCTGCCGTGCCATGCCCGTCTAACCCAGTGAAACTGAAGCTATAGTCCTCTTTACGACAACGGAACCCATGCGGGAGCACTCATAAATATGCCAACATATATGTTTCATGGGTGGTGTACCGAAATATTTAATATCGACTCACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCACTAACGACGGTACTGACGCACTCCTCGCTCCCTCTGTTCCGGTGTCTCCAACTCTCTCCACACGAAACGAAGGGGACTCTCTCGACT
CCTATCCTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTCTGCCCGTAAAAGATAGGCGAATTCACTTAAGCCTACGTCAGACATTAGTCCTTTTTCTGACATGGGGAGGCATAGCACAGATCAGCGTGTGCGCGTTTCCGCGGATGCAATCGGGACGGGAACTGTTCGGGTGGAGTCCGGTCATCCGAAACCCAGCGATTCGGATTAGGGGTGGACCATCCTAGCCCCCCACCCCTTTGTTTCAGGTGGAACGACAGACATCCCTGGGGAGGGGGTGGAGAATTACCGATCAAATCGGGAGCGGACCAGCTGTTCAAATCGGCGCGACTCGCCATACCGCTAGTTAGAACGGCCTAGACACTAGAAAACTGTATACTACCCTCTACTAGGGATTTGTTTTATCTAGTGCGGCTTTGGTTTATGAGGTAGTGTATTAAACCTTTCCCCTTACTAGAGGACATTTTCGTCACCCTCACCCCCTCCCCCCGGGCCTGTTTCCCGTTCCACCGGAAACGGAGGGGTGGGGGGGGTTGGCCCGTTACGGTCGCTTTGTCCTACAGGTCCCGTCCTGCCGTGGTACCACCACTCGTGTTCACACAGCGTACCAGCTCCCGGAACCACTCCATGGCTCCCCTTCCCCTCCACTCATACCCCTGCCGTGCCATGCCCGTCTAACCCAGTGAAACTGAAGCTATAGTCCTCTTTACGACAACGGAACCCATGCGGGAGCACTCATAAATATGCCAACATATATGTTTCATGGGTGGTGTACCGAAATATTTAATATCGACTCACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCACTAACGACGGTACTGACGCACTCCTCGCTCCCTCTGTTCCGGTGTCTCCAACTCTCTCCACACGAAACGAAGGGGACTCTCTCGACT
CCTATCCTCCCGCCGCCCGGAGTCGTCCGGTATGGCGGCTCTGCCCGTAAAAGATAGGCGAATTCACTTAAGCCTACGTCAGACATTAGTCCTTTTTCTGACATGGGGAGGCATAGCACAGATCAGCGTGTGCGCGTTTCCGCGGATGCAATCGGGACGGGAACTGTTCGGGTGGAGTCCGGTCATCCGAAACCCAGCGATTCGGATTAGGGGTGGACCATCCTAGCCCCCCACCCCTTTGTTTCAGGTGGAACGACAGACATCCCTGGGGAGGGGGTGGAGAATTACCGATCAAATCGGGAGCGGACCAGCTGTTCAAATCGGCGCGACTCGCCATACCGCTAGTTAGAACGGCCTAGACACTAGAAAACTGTATACTACCCTCTACTAGGGATTTGTTTTATCTAGTGCGGCTTTGGTTTATGAGGTAGTGTATTAAACCTTTCCCCTTACTAGAGGACATTTTCGTCACCCTCACCCCCTCCCCCCGGGCCTGTTTCCCGTTCCACCGGAAACGGAGGGGTGGGGGGGGTTGGCCCGTTACGGTCGCTTTGTCCTACAGGTCCCGTCCTGCCGTGGTACCACCACTCGTGTTCACACAGCGTACCAGCTCCCGGAACCACTCCATGGCTCCCCTTCCCCTCCACTCATACCCCTGCCGTGCCATGCCCGTCTAACCCAGTGAAACTGAAGCTATAGTCCTCTTTACGACAACGGAACCCATGCGGGAGCACTCATAAATATGCCAACATATATGTTTCATGGGTGGTGTACCGAAATATTTAATATCGACTCACGGTACGGTTCATGTGGTTCAACTGGACGCACCGGAGAGCGCTGATGCTCACTAACGACGGTACTGACGCACTCCTCGCTCCCTCTGTTCCGGTGTCTCCAACTCTCTCCACACGAAACGAAGGGGACTCTCTCGACT
ORB     AT-rich region
The information of repeat sequences

Motif TWTGKTTYATGTGG

StartP-valueSite
2384.39e-08CCCCCACCCCTTTGTTTCAGGTGGAACGACAGAC
4156.23e-08CTAGTGCGGCTTTGGTTTATGAGGTAGTGTATTA
8001.44e-07CGACTCACGGTACGGTTCATGTGGTTCAACTGGA
7542.08e-07TGCCAACATATATGTTTCATGGGTGGTGTACCGA
3952.52e-07CTACTAGGGATTTGTTTTATCTAGTGCGGCTTTG

Motif CAHCSGAAACSVAGSGG

StartP-valueSite
9061.37e-09CAACTCTCTCCACACGAAACGAAGGGGACTCTCTCGA
5071.37e-09TTTCCCGTTCCACCGGAAACGGAGGGGTGGGGGGGGT
1842.80e-08GGAGTCCGGTCATCCGAAACCCAGCGATTCGGATTAG
7123.43e-08CTCTTTACGACAACGGAACCCATGCGGGAGCACTCAT

Motif GWTSMAATCGG

StartP-valueSite
2901.60e-07GAGAATTACCGATCAAATCGGGAGCGGACCA
3144.72e-07CGGACCAGCTGTTCAAATCGGCGCGACTCGC
1451.04e-06CGTTTCCGCGGATGCAATCGGGACGGGAACT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010246 100.0 934 0 0 1 934 1 934 0.0 1725
aORI10010185 100.0 934 0 0 1 934 1 934 0.0 1725
aORI10010293 99.143 934 6 2 1 934 1 932 0.0 1679
aORI10010127 82.682 947 134 23 1 929 1 935 0.0 813
aORI10010313 80.021 946 153 27 1 932 1 924 0.0 667