RefSeq NC_013158.1
DoriC accession number aORI10010149
OriC length 1022 nt
OriC AT content 0.5049
The location of oriC region 1595322..1596343 nt
Browse in NCBI
OriC map
OriC sequences
GTGGTTTTCATCCCCCTTCTTTCAGGTGGAGATTCGCCCGCAGATCCGAGATAGCGGCCGAAAACGGCCTGTAGAACCGATATGGCGGATTTCGAGATGGCGATCTTGGTGCAGTTGAACCACAAGAACCGGTGGGTGAAAGGCTATTAAAAATTTCGGTTCAGATCGTGCCCAGTCGATGATGATGGATTCGGAGAGGTGATCATGTCCGGTGAATCAGTTTGCAGAGGTCCAAGCACCGTCCGGATTGGAGTGGTCTGGTTTCCGGATTGGAGGGAGCCTGGTTTTACAGGCTTCGATGCGAATTCCCGGAGCTTGCCCCCGAGACGATCCACACATCTGCATGAAGTCTGGAGAGGTTTGTCATTGAGTGCTATTGTCAAAGACACCCTCCCCCACCCCTTCGTTTCGAGTGGAACAGTCCAAACACCCGGGGAGGGGGGTTCAGCAACCGGGTAAGGACAATCTAGAAAAGTCGGGTTTTATTAGAGAGTACATATAACAGTAACCGTAATGGGAACCAATTCTCTCATTGAATAAATTTAAAGTGTCTAGTAGATATTAGTACTAGATCTACCTAGAACAAAAGTACTAGTTTCCACTAGAGGTTCTGTATGGCACTCTCATCTCCATTGACGATGGTTCTCAGTCGGTACTAATCGGTGTTAGTTGGTCCTTCCTGAGACGATCCGCTGATATACTGTCGAACGGTTTCGGCGATCAGTTTGGCCTCACCCGATGCTTTGCCGTTCTGCTCTACAGTGTAAGATACCGAATCATCCAATATGCATCACGACTGCAGTAGAAACGATCCCGTGCATTCCGGAGACTGATAGTCTATTATATACTGGTCTATACCAGTCTGATGTCATGGTTTCGTTATATCTACCCATCGCCAATATCGAATCGCCACCGAGTCGGTCTGCGTGTGGATTTTCGCTCGTTCGGACGATCTGTACCGGTCAGCGCATGGTCCACCCGGTGGTTCACGGTGTTCCACTTGAAACGAAGGGGTGGGGGGT
GTGGTTTTCATCCCCCTTCTTTCAGGTGGAGATTCGCCCGCAGATCCGAGATAGCGGCCGAAAACGGCCTGTAGAACCGATATGGCGGATTTCGAGATGGCGATCTTGGTGCAGTTGAACCACAAGAACCGGTGGGTGAAAGGCTATTAAAAATTTCGGTTCAGATCGTGCCCAGTCGATGATGATGGATTCGGAGAGGTGATCATGTCCGGTGAATCAGTTTGCAGAGGTCCAAGCACCGTCCGGATTGGAGTGGTCTGGTTTCCGGATTGGAGGGAGCCTGGTTTTACAGGCTTCGATGCGAATTCCCGGAGCTTGCCCCCGAGACGATCCACACATCTGCATGAAGTCTGGAGAGGTTTGTCATTGAGTGCTATTGTCAAAGACACCCTCCCCCACCCCTTCGTTTCGAGTGGAACAGTCCAAACACCCGGGGAGGGGGGTTCAGCAACCGGGTAAGGACAATCTAGAAAAGTCGGGTTTTATTAGAGAGTACATATAACAGTAACCGTAATGGGAACCAATTCTCTCATTGAATAAATTTAAAGTGTCTAGTAGATATTAGTACTAGATCTACCTAGAACAAAAGTACTAGTTTCCACTAGAGGTTCTGTATGGCACTCTCATCTCCATTGACGATGGTTCTCAGTCGGTACTAATCGGTGTTAGTTGGTCCTTCCTGAGACGATCCGCTGATATACTGTCGAACGGTTTCGGCGATCAGTTTGGCCTCACCCGATGCTTTGCCGTTCTGCTCTACAGTGTAAGATACCGAATCATCCAATATGCATCACGACTGCAGTAGAAACGATCCCGTGCATTCCGGAGACTGATAGTCTATTATATACTGGTCTATACCAGTCTGATGTCATGGTTTCGTTATATCTACCCATCGCCAATATCGAATCGCCACCGAGTCGGTCTGCGTGTGGATTTTCGCTCGTTCGGACGATCTGTACCGGTCAGCGCATGGTCCACCCGGTGGTTCACGGTGTTCCACTTGAAACGAAGGGGTGGGGGGT
GTGGTTTTCATCCCCCTTCTTTCAGGTGGAGATTCGCCCGCAGATCCGAGATAGCGGCCGAAAACGGCCTGTAGAACCGATATGGCGGATTTCGAGATGGCGATCTTGGTGCAGTTGAACCACAAGAACCGGTGGGTGAAAGGCTATTAAAAATTTCGGTTCAGATCGTGCCCAGTCGATGATGATGGATTCGGAGAGGTGATCATGTCCGGTGAATCAGTTTGCAGAGGTCCAAGCACCGTCCGGATTGGAGTGGTCTGGTTTCCGGATTGGAGGGAGCCTGGTTTTACAGGCTTCGATGCGAATTCCCGGAGCTTGCCCCCGAGACGATCCACACATCTGCATGAAGTCTGGAGAGGTTTGTCATTGAGTGCTATTGTCAAAGACACCCTCCCCCACCCCTTCGTTTCGAGTGGAACAGTCCAAACACCCGGGGAGGGGGGTTCAGCAACCGGGTAAGGACAATCTAGAAAAGTCGGGTTTTATTAGAGAGTACATATAACAGTAACCGTAATGGGAACCAATTCTCTCATTGAATAAATTTAAAGTGTCTAGTAGATATTAGTACTAGATCTACCTAGAACAAAAGTACTAGTTTCCACTAGAGGTTCTGTATGGCACTCTCATCTCCATTGACGATGGTTCTCAGTCGGTACTAATCGGTGTTAGTTGGTCCTTCCTGAGACGATCCGCTGATATACTGTCGAACGGTTTCGGCGATCAGTTTGGCCTCACCCGATGCTTTGCCGTTCTGCTCTACAGTGTAAGATACCGAATCATCCAATATGCATCACGACTGCAGTAGAAACGATCCCGTGCATTCCGGAGACTGATAGTCTATTATATACTGGTCTATACCAGTCTGATGTCATGGTTTCGTTATATCTACCCATCGCCAATATCGAATCGCCACCGAGTCGGTCTGCGTGTGGATTTTCGCTCGTTCGGACGATCTGTACCGGTCAGCGCATGGTCCACCCGGTGGTTCACGGTGTTCCACTTGAAACGAAGGGGTGGGGGGT
ORB     AT-rich region
The information of repeat sequences

Motif CYGWGHCGDTCHGC

StartP-valueSite
6806.03e-09TTGGTCCTTCCTGAGACGATCCGCTGATATACTG
9132.58e-07CGAATCGCCACCGAGTCGGTCTGCGTGTGGATTT
3222.74e-07GAGCTTGCCCCCGAGACGATCCACACATCTGCAT
9549.94e-07TTCGGACGATCTGTACCGGTCAGCGCATGGTCCA
7421.24e-06TCACCCGATGCTTTGCCGTTCTGCTCTACAGTGT

Motif CCASTAGAAMCGA

StartP-valueSite
689.64e-08CCGAAAACGGCCTGTAGAACCGATATGGCGGAT
7993.31e-07CATCACGACTGCAGTAGAAACGATCCCGTGCAT
9974.12e-07TCACGGTGTTCCACTTGAAACGAAGGGGTGGGG
1207.57e-07TGCAGTTGAACCACAAGAACCGGTGGGTGAAAG
371.53e-06TGGAGATTCGCCCGCAGATCCGAGATAGCGGCC

Motif CCYCACCC

StartP-valueSite
3948.32e-06AGACACCCTCCCCCACCCCTTCGTTTCG
7301.80e-05ATCAGTTTGGCCTCACCCGATGCTTTGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010149 100.0 1022 0 0 1 1022 1 1022 0.0 1888
aORI10010248 85.227 176 25 1 6 180 1152 977 0.0 180
aORI10010127 92.105 38 3 0 984 1021 272 235 1.04e-08 55
aORI10010201 100.0 28 0 0 994 1021 527 500 3.73e-08 53