Basic Information

Assembly acc GCF_023278485.2
Acc NZ_CP076380.2
OriID ORI97257007
Organism Mycobacterium intracellulare
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5405563 nt
Chromosome GC content 68.11%
Indicator genes
  • dnaN      1635224... 1636423nt
  • dnaA      1636959... 1638494nt
  • rpmH      1639097... 1639240nt
  • hemB      2279643... 2280632nt
  • hemE      3371118... 3372191nt
OriC location
  • 1636423 ... 1636958 nt
OriC Length
  • 535 nt
OriC AT Content
  • 0.39

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207500 NZ_AP024255.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
2 ORI97207506 NZ_AP024259.1 Mycobacterium paraintracellulare 100.00% 100.00% Not linked
3 ORI97227812 NZ_CP023149.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
4 ORI97255259 NZ_CP089220.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
5 ORI97207494 NZ_AP024251.1 Mycobacterium paraintracellulare 99.60% 100.00% Not linked
6 ORI97207502 NZ_AP024257.1 Mycobacterium paraintracellulare 99.60% 100.00% Not linked
7 ORI97207504 NZ_AP024258.1 Mycobacterium paraintracellulare 99.60% 100.00% Not linked
8 ORI97257009 NZ_CP076381.2 Mycobacterium intracellulare 99.20% 100.00% Not linked
9 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 98.80% 100.00% Not linked
10 ORI97207482 NZ_AP024243.1 Mycobacterium paraintracellulare 98.80% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP076380.2
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Replication Initiation Protein Information

Gene Start Gene End Translation
1636959 1638494 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnanAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaa
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAAAGACCGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAAATTGCGCGCAGGGGCGCCGAAAACCCGGGATdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 83.11% 527 71 15 1 517 569 51 0.0 464.0
ORI10040011 82.89% 520 71 15 1 510 569 58 0.0 451.0
Found 2 BLAST matches
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