Basic Information

Assembly acc GCF_023278505.2
Acc NZ_CP076381.2
OriID ORI97257009
Organism Mycobacterium intracellulare
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Chromosome
Literature linkage Not linked
Chromosome size 5208102 nt
Chromosome GC content 68.09%
Indicator genes
  • dnaN      1375164... 1376363nt
  • dnaA      1376899... 1378434nt
  • rpmH      1379037... 1379180nt
  • hemB      2085084... 2086073nt
  • hemE      3165191... 3166264nt
OriC location
  • 1376363 ... 1376898 nt
OriC Length
  • 535 nt
OriC AT Content
  • 0.39

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 99.60% 100.00% Not linked
2 ORI97207482 NZ_AP024243.1 Mycobacterium paraintracellulare 99.60% 100.00% Not linked
3 ORI97207484 NZ_AP024244.1 Mycobacterium intracellulare 99.60% 100.00% Not linked
4 ORI97207496 NZ_AP024253.1 Mycobacterium paraintracellulare 99.60% 100.00% Not linked
5 ORI97207498 NZ_AP024254.1 Mycobacterium intracellulare 99.60% 100.00% Not linked
6 ORI97207514 NZ_AP024265.1 Mycobacterium intracellulare M.i.198 99.60% 100.00% Not linked
7 ORI97209905 NZ_CP089222.1 Mycobacterium intracellulare subsp. intracellulare 99.60% 100.00% Not linked
8 ORI97226924 NC_016946.1 Mycobacterium intracellulare ATCC 13950 99.60% 100.00% Not linked
9 ORI97226925 NC_016947.1 Mycobacterium intracellulare MOTT-02 99.60% 100.00% Not linked
10 ORI97226952 NC_018612.1 Mycobacterium intracellulare subsp. intracellulare MTCC 9506 99.60% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP076381.2
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Replication Initiation Protein Information

Gene Start Gene End Translation
1376899 1378434 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnanAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaa
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGGCTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAGGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAAACCGGGGATdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 83.11% 527 71 15 1 517 569 51 0.0 464.0
ORI10040011 82.89% 520 71 15 1 510 569 58 0.0 451.0
Found 2 BLAST matches
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