RefSeq NC_014104
DoriC accession number pORI00000156
OriC length 1031 nt
OriC AT content 0.5354
The location of oriC region 6677..7707 nt
Browse in NCBI
OriC map
OriC sequences
GAATCACCTCGTAAAATAGGTTCGCTATGGAGAGGCCAGACACCTGCACCCTTTATTATGTTTGAGTTGTTTTGAAAAGGGTGCATTTCAAAAGGAGCGCTGCATACCTAAACTAGAGGAAAAATCCAGTCATGACAGGGGGCTGACTGGGTTCTTTTATGTTTGAGTTTGTTTTGGAATTTAGGAGCGGTCACGGAGTGCCCAGTTATACGCACCAAATAAATTGGGGCGTACTGGCGGAAATGACCCGGAGGGGCTTTTGATAAAGAGGAGGGGGTAGTAATGCAAAAGATTGATTTTGAAACAGGGATGAAATATGTAAGAGCAACCCTTGGCTTTGAGGGCTTAGTGCTGACGGCAGAAGAGGAAAAGCTTTTAGAAAGGCGGTTTCATGGAGAAATCACAGAAGAAGAATACATAAGAAAAGCGCTGGAGCTGTCTTATCTCTAAATGGGCAGCGGGCGCTCTTGGCGTGAGTCAACGGTAACCGGACCGTAGGGAGGATTAAGGAGTTGACTCATTCAGCGCCACCCGAACCCTTTCAGCACTCAAACAAACCCGTTTGTTTGACGCCAACCGGCGAGGGAGTCCCCCGAAGATTCGGGGGGTTGGGGGGATTGAGTATTGGCATCCAACGGCTATCCGTTGGTGGGTTTGGGCAAAGCCCAAGAACTTGACTAGTGAATTGGGACTAAGTTACTCTTGAAGGAGAAAAAAGATCGGGAAAAATAGTTGGTGAGAGAAGGGAGCGTAAGGCGACGGCAGTCGCCGAGCGGCAGCGATAGCGACCGGATCGAATCCAACCGAATACCCCTCCTATGCTAACAGGGGGGTAGTAATCGTAAGTGTTAAGCGGAATCCAAATGTGATTCCGTTTTTTTATTTCAAGTATTTGTTGTGTAGTAATGAGATTCCTATTCCGGAAATATTATCGTTGCGGCATGTCGAAAATTTTCCGCAACAAAGTTATCAATCCTTCTCTTATGCTACCATTTTCATAAAAAGGATTAAACTGGAGGGGGACGAGTTTT
GAATCACCTCGTAAAATAGGTTCGCTATGGAGAGGCCAGACACCTGCACCCTTTATTATGTTTGAGTTGTTTTGAAAAGGGTGCATTTCAAAAGGAGCGCTGCATACCTAAACTAGAGGAAAAATCCAGTCATGACAGGGGGCTGACTGGGTTCTTTTATGTTTGAGTTTGTTTTGGAATTTAGGAGCGGTCACGGAGTGCCCAGTTATACGCACCAAATAAATTGGGGCGTACTGGCGGAAATGACCCGGAGGGGCTTTTGATAAAGAGGAGGGGGTAGTAATGCAAAAGATTGATTTTGAAACAGGGATGAAATATGTAAGAGCAACCCTTGGCTTTGAGGGCTTAGTGCTGACGGCAGAAGAGGAAAAGCTTTTAGAAAGGCGGTTTCATGGAGAAATCACAGAAGAAGAATACATAAGAAAAGCGCTGGAGCTGTCTTATCTCTAAATGGGCAGCGGGCGCTCTTGGCGTGAGTCAACGGTAACCGGACCGTAGGGAGGATTAAGGAGTTGACTCATTCAGCGCCACCCGAACCCTTTCAGCACTCAAACAAACCCGTTTGTTTGACGCCAACCGGCGAGGGAGTCCCCCGAAGATTCGGGGGGTTGGGGGGATTGAGTATTGGCATCCAACGGCTATCCGTTGGTGGGTTTGGGCAAAGCCCAAGAACTTGACTAGTGAATTGGGACTAAGTTACTCTTGAAGGAGAAAAAAGATCGGGAAAAATAGTTGGTGAGAGAAGGGAGCGTAAGGCGACGGCAGTCGCCGAGCGGCAGCGATAGCGACCGGATCGAATCCAACCGAATACCCCTCCTATGCTAACAGGGGGGTAGTAATCGTAAGTGTTAAGCGGAATCCAAATGTGATTCCGTTTTTTTATTTCAAGTATTTGTTGTGTAGTAATGAGATTCCTATTCCGGAAATATTATCGTTGCGGCATGTCGAAAATTTTCCGCAACAAAGTTATCAATCCTTCTCTTATGCTACCATTTTCATAAAAAGGATTAAACTGGAGGGGGACGAGTTTT
AT-rich region
The information of repeat sequences

Motif TGWTTGVGTTBTTTT

StartP-valueSite
591.76e-08CCCTTTATTATGTTTGAGTTGTTTTGAAAAGGGTG
8672.28e-08AATCCAAATGTGATTCCGTTTTTTTATTTCAAGTA
1603.19e-08GGTTCTTTTATGTTTGAGTTTGTTTTGGAATTTAG
1447.12e-08GACAGGGGGCTGACTGGGTTCTTTTATGTTTGAGT

Motif CACCYGMACCCTTT

StartP-valueSite
411.02e-09AGAGGCCAGACACCTGCACCCTTTATTATGTTTG
5291.69e-09CATTCAGCGCCACCCGAACCCTTTCAGCACTCAA

Motif TMCYYCTCYTATGCTAMC

StartP-valueSite
9742.81e-11AAGTTATCAATCCTTCTCTTATGCTACCATTTTCATAA
8092.81e-11TCCAACCGAATACCCCTCCTATGCTAACAGGGGGGTAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000156 100.0 1031 0 0 1 1031 1 1031 0.0 1905
pORI00000168 94.56 386 19 2 284 668 1196 812 0.0 595
pORI00000165 94.059 202 12 0 469 670 188 389 0.0 307
pORI00000164 92.958 213 12 3 462 674 383 592 0.0 307
pORI00000164 91.195 159 12 2 284 442 123 279 0.0 215
pORI00000166 92.308 65 2 3 197 259 16 79 9.86e-19 90
pORI00000166 97.674 43 1 0 470 512 167 209 2.76e-14 75