RefSeq NC_001766
DoriC accession number pORI00000165
OriC length 1037 nt
OriC AT content 0.5921
The location of oriC region 6162..7198 nt
Browse in NCBI
OriC map
OriC sequences
GTGTTATGGTCTCATTATCTTTTCGCAAGGATTTAGGCGGGGTGGCACTCCCGCATCTCCAACATAGGGTGATGGCTGCCTGTTCCATCCTCAGAAATCCTTCTTATTAGTTTATTCAACTTTCTATATTTATTATACATGTGAAAATTTTATGTTTCAAGGGTGGTTTTATTTAAACGAGTTTTTATGGCGTGAGTCAACGGTAACCGGACCGTAGGGAGGATTAAGGAGTTGACTCGCTCAGTGCTACCCGAACCCTTTCAGCACTCAAACAAACTCGTTTGTTTGACGCCAACCGGCGAGGGAGCCCCCCGGAGATGCGGGGGGTTGGGGGGATTGAATGTTGGAATCCAACGGCCATCCGTTGGTGGGTTTGGGCAAAGCCCAAGGTTCTACTTTAACTCTTGATGCAATTTGTTGTTTTTGTCGAGCAAGACAATTCCTTCAGGGCTTCGTTCTGGGAAGTGTTGTGTGAGATTTAGCTTTTGATCAGAAAGCAACTCCTGCATTTTCTTTTGTGCTTCAGCGAGCGTTTCGATTTTCAATTTTTATTCCTCCGGCGTTTTTGTCATAATACTAGCATGAGGTGGCGCTACCAGTAGCCCACGTAAAAAATAGATAGCTGGATAAGAGGGACGGATGCTTTTTAGCAATCCGTCTTTTTTGTTTGAGAGGTTAATAGATAATGATAAATAGCTCTGAGGATTCTCAGATTCGTTCCTGAGAGGTTTTAATTTTAAAATAGAGTAAAAGGTCACAGGGGAATTTAGGGACGCTGTATTGAGCTTTAAATGGATTTTTTGCATCTTTGTTTTCGAGAGAAAATTTTTGTTTTGAAAAATGAAACGAAAGGGCTTTTTTTCATGAGTAAGGATGCTTTTGTGTAAAAATAATCCTAATCGATTTTGTTAATTTAAAATATTTCGCTTTCGGCTTACCGAAAATTTAAGGTTCGGCGTCCGCAACCCCGATTTTACAGCTTTTTCTGTGCTACCATTTACAAAAAAAGTATTAAATTAGGGGAGGAGTTACTCGGA
GTGTTATGGTCTCATTATCTTTTCGCAAGGATTTAGGCGGGGTGGCACTCCCGCATCTCCAACATAGGGTGATGGCTGCCTGTTCCATCCTCAGAAATCCTTCTTATTAGTTTATTCAACTTTCTATATTTATTATACATGTGAAAATTTTATGTTTCAAGGGTGGTTTTATTTAAACGAGTTTTTATGGCGTGAGTCAACGGTAACCGGACCGTAGGGAGGATTAAGGAGTTGACTCGCTCAGTGCTACCCGAACCCTTTCAGCACTCAAACAAACTCGTTTGTTTGACGCCAACCGGCGAGGGAGCCCCCCGGAGATGCGGGGGGTTGGGGGGATTGAATGTTGGAATCCAACGGCCATCCGTTGGTGGGTTTGGGCAAAGCCCAAGGTTCTACTTTAACTCTTGATGCAATTTGTTGTTTTTGTCGAGCAAGACAATTCCTTCAGGGCTTCGTTCTGGGAAGTGTTGTGTGAGATTTAGCTTTTGATCAGAAAGCAACTCCTGCATTTTCTTTTGTGCTTCAGCGAGCGTTTCGATTTTCAATTTTTATTCCTCCGGCGTTTTTGTCATAATACTAGCATGAGGTGGCGCTACCAGTAGCCCACGTAAAAAATAGATAGCTGGATAAGAGGGACGGATGCTTTTTAGCAATCCGTCTTTTTTGTTTGAGAGGTTAATAGATAATGATAAATAGCTCTGAGGATTCTCAGATTCGTTCCTGAGAGGTTTTAATTTTAAAATAGAGTAAAAGGTCACAGGGGAATTTAGGGACGCTGTATTGAGCTTTAAATGGATTTTTTGCATCTTTGTTTTCGAGAGAAAATTTTTGTTTTGAAAAATGAAACGAAAGGGCTTTTTTTCATGAGTAAGGATGCTTTTGTGTAAAAATAATCCTAATCGATTTTGTTAATTTAAAATATTTCGCTTTCGGCTTACCGAAAATTTAAGGTTCGGCGTCCGCAACCCCGATTTTACAGCTTTTTCTGTGCTACCATTTACAAAAAAAGTATTAAATTAGGGGAGGAGTTACTCGGA
AT-rich region
The information of repeat sequences

Motif GCTWCCVSDASCS

StartP-valueSite
2463.70e-09CTCGCTCAGTGCTACCCGAACCCTTTCAGCACT
9562.97e-07TTAAGGTTCGGCGTCCGCAACCCCGATTTTACA
5927.28e-07ATGAGGTGGCGCTACCAGTAGCCCACGTAAAAA
2021.81e-06GTGAGTCAACGGTAACCGGACCGTAGGGAGGAT
5202.15e-06TTTCTTTTGTGCTTCAGCGAGCGTTTCGATTTT

Motif GCCAHCCG

StartP-valueSite
3576.42e-06GAATCCAACGGCCATCCGTTGGTGGGTT
2919.61e-06TTTGTTTGACGCCAACCGGCGAGGGAGC
3071.40e-05CGGCGAGGGAGCCCCCCGGAGATGCGGG
6502.56e-05ATGCTTTTTAGCAATCCGTCTTTTTTGT

Motif CTCCNRCA

StartP-valueSite
487.72e-06CGGGGTGGCACTCCCGCATCTCCAACAT
571.27e-05ACTCCCGCATCTCCAACATAGGGTGATG
5012.64e-05CAGAAAGCAACTCCTGCATTTTCTTTTG
5556.00e-05ATTTTTATTCCTCCGGCGTTTTTGTCAT
2677.50e-05CCTTTCAGCACTCAAACAAACTCGTTTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000165 100.0 1037 0 0 1 1037 1 1037 0.0 1916
pORI00000168 85.891 404 47 7 188 586 1012 614 0.0 422
pORI00000164 94.175 206 8 4 184 389 387 588 0.0 311
pORI00000156 94.059 202 12 0 188 389 469 670 0.0 307
pORI00000166 97.674 43 1 0 189 231 167 209 2.78e-14 75