RefSeq NC_006830
DoriC accession number pORI00000196
OriC length 1144 nt
OriC AT content 0.34
The location of oriC region 79618..80761 nt
Browse in NCBI
OriC map
OriC sequences
TCGGCGCGGGCCTGGCCCCGCGTCTCACGTTTCATTGACACTTGAGGGGCGCTTTCCGCGCCACCGGCCGAGCTGGCCGACCCCCTTCCTTGGCGTAAAACCTGCGGCGGTGGAGCTGCTGCGATGCTTGAGGATCGCGCGGCCGGTCGAACCGCGGCGACCTGGTTGGGGAGTGTGAGGGGGCTTTGCCCCCTCGCAAGCTCTCGAACTTACTGCCTTCCGCCAGGCGCTTGCGCCTGGCTCTCCTAAGCCGTAGCGCCGAAGGCGCTCCATTGTGGGGTGAGGCCGCAAGGCGGCCGAGGGGCGTAGCCCCTGGGGGGATGGGAGGCCGCTTGCGGCCGGGTGGGATCGAGAAGGGGGGTTTCCCCCCTTCGGCGGCCGGTCATGCTGCGCGGCAGCTTGGGCCGTGTTGCCGTTTTTTTCGCCAGCCTCTGGTTAAAACTACCTGGTTATATAAAAAGGTTATAAAGACGGTTAAAAACCTGGTTAGCATGACCGAAAAACGCGCGTAAACCGTTGTCACGCCAAGGAAAAGTGCGAAGAGGCCGCCCCTCAAGTGTCAATGGATAAGCCCCCCATGTGTCAATACGCTGCCCCTCAAGTGTCAAGAACCGCGCCCCTCAAGTGTCAGTAGGGCCGCCCCTCAAGTGTCAATACCGGGGCAGGGTTCCTAACAGGGTTATCCACAACTTCGGTGGATAACTCCATGCCGATCAGGCACTTAGGCCGCCTCGGCGGCCGCCTGGACGGCTCGACCAGGCCGAAATCGGCCGCTGCCCCCCAAGTGTCAACATCGCGCCGGCCTCGCTGCCCCTCAAGTGTCAACGTCAGGGCTGCGCCGGCCGGCCTCGGCCGACTTGTCCCGAAACTGTCCACAACGGCCGCGCCGGTGGGGCAGGGCAGGGAAGGCCCCGGAAACGGGCCAGGAAGGCCCGTCAGGGCCGCAAAGCCCAGCGGCGAGGGCCACCGGCCCGGTGAGCGTCGGGAAGGCGCTGGAAGCCCGCCAGGGGCGAGACGGGCGGCTCTGCCGCCTGGCTCGATGCGCAGCACGACATAGCCGGTTCTCGCGGCCGCCGGCCGGGAGAATCCCCCGCAGCTCGGCCCCTCAAGTGTCAAAGGGTGGATCTCATCGTCAGAAGCGGCG
TCGGCGCGGGCCTGGCCCCGCGTCTCACGTTTCATTGACACTTGAGGGGCGCTTTCCGCGCCACCGGCCGAGCTGGCCGACCCCCTTCCTTGGCGTAAAACCTGCGGCGGTGGAGCTGCTGCGATGCTTGAGGATCGCGCGGCCGGTCGAACCGCGGCGACCTGGTTGGGGAGTGTGAGGGGGCTTTGCCCCCTCGCAAGCTCTCGAACTTACTGCCTTCCGCCAGGCGCTTGCGCCTGGCTCTCCTAAGCCGTAGCGCCGAAGGCGCTCCATTGTGGGGTGAGGCCGCAAGGCGGCCGAGGGGCGTAGCCCCTGGGGGGATGGGAGGCCGCTTGCGGCCGGGTGGGATCGAGAAGGGGGGTTTCCCCCCTTCGGCGGCCGGTCATGCTGCGCGGCAGCTTGGGCCGTGTTGCCGTTTTTTTCGCCAGCCTCTGGTTAAAACTACCTGGTTATATAAAAAGGTTATAAAGACGGTTAAAAACCTGGTTAGCATGACCGAAAAACGCGCGTAAACCGTTGTCACGCCAAGGAAAAGTGCGAAGAGGCCGCCCCTCAAGTGTCAATGGATAAGCCCCCCATGTGTCAATACGCTGCCCCTCAAGTGTCAAGAACCGCGCCCCTCAAGTGTCAGTAGGGCCGCCCCTCAAGTGTCAATACCGGGGCAGGGTTCCTAACAGGGTTATCCACAACTTCGGTGGATAACTCCATGCCGATCAGGCACTTAGGCCGCCTCGGCGGCCGCCTGGACGGCTCGACCAGGCCGAAATCGGCCGCTGCCCCCCAAGTGTCAACATCGCGCCGGCCTCGCTGCCCCTCAAGTGTCAACGTCAGGGCTGCGCCGGCCGGCCTCGGCCGACTTGTCCCGAAACTGTCCACAACGGCCGCGCCGGTGGGGCAGGGCAGGGAAGGCCCCGGAAACGGGCCAGGAAGGCCCGTCAGGGCCGCAAAGCCCAGCGGCGAGGGCCACCGGCCCGGTGAGCGTCGGGAAGGCGCTGGAAGCCCGCCAGGGGCGAGACGGGCGGCTCTGCCGCCTGGCTCGATGCGCAGCACGACATAGCCGGTTCTCGCGGCCGCCGGCCGGGAGAATCCCCCGCAGCTCGGCCCCTCAAGTGTCAAAGGGTGGATCTCATCGTCAGAAGCGGCG
AT-rich region
The information of repeat sequences

Motif GCYGCCCCTCAAGTGTCAA

StartP-valueSite
8073.36e-12CGCCGGCCTCGCTGCCCCTCAAGTGTCAACGTCAGGGCT
5903.36e-12GTGTCAATACGCTGCCCCTCAAGTGTCAAGAACCGCGCC
6369.92e-12TGTCAGTAGGGCCGCCCCTCAAGTGTCAATACCGGGGCA
5459.92e-12GTGCGAAGAGGCCGCCCCTCAAGTGTCAATGGATAAGCC
7731.65e-11GAAATCGGCCGCTGCCCCCCAAGTGTCAACATCGCGCCG

Motif GCCCCTCAHGTGTCADT

StartP-valueSite
11012.53e-10CCGCAGCTCGGCCCCTCAAGTGTCAAAGGGTGGATCT
6163.97e-10CAAGAACCGCGCCCCTCAAGTGTCAGTAGGGCCGCCC
5711.39e-09CAATGGATAAGCCCCCCATGTGTCAATACGCTGCCCC
205.13e-09GCCTGGCCCCGCGTCTCACGTTTCATTGACACTTGAG

Motif TWHMWAAMMDGGTTAKMMWSA

StartP-valueSite
4511.39e-13ACTACCTGGTTATATAAAAAGGTTATAAAGACGGTTAAAAA
4751.68e-11ATAAAGACGGTTAAAAACCTGGTTAGCATGACCGAAAAACG
6682.01e-11CGGGGCAGGGTTCCTAACAGGGTTATCCACAACTTCGGTGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000196 100.0 1144 0 0 1 1144 1 1144 0.0 2113
pORI00000088 79.222 823 114 41 28 825 173 963 0.0 520
pORI00000560 92.771 83 6 0 1062 1144 288 206 3.89e-28 121
pORI00000018 82.609 138 14 7 940 1068 1131 1267 6.5e-26 113