RefSeq NC_019312
DoriC accession number pORI00000560
OriC length 749 nt
OriC AT content 0.3658
The location of oriC region 1222..1970 nt
Browse in NCBI
OriC map
OriC sequences
TCGCCCCCCTGCCCTCCCCTGGAGCCGCCCGAGATCGAGGCGGCTTTTTTCTCGAGCATCGCCACTTCCGGCGAGGCAGTACCGCGCACCAGCTCGCGCACGTCGAGCTGCAGCATCGTCACTTCCGGCGAGGCTGGCCACGTCCTGGCCACGTCCTGGCCACGGTCGACCATCGCCACATCCAACGATGCCCCGAGGGCCCCATCGCCACTTCCGACGATGAGATCCGCTCTTTGACATTTGAGGGGCCAAGCTGCGGGGGATTCTCCCGGCCGGCGGCCGCGAGAAGGGGTTCTAAGCCGGAACCGCCGAAAATTCCGTCAGCCGATCAACGTGGCTTGTCCCGCGCCCGGTCGATGGGGTAGACCCAACAGTCGTGTCACTAGCCGCCATTTCGATCACGGCAATGCCAGCCGGACGTCACGTCCAGATTGTTCCGGTCTGGATGAGGCCGACTGACGTCTCGGATGACGGGTGGCATACAACTGCTGTGAGTCCTGCAGGGGGGCAGCTGCCTGACCGGACGGCGAGCATCAGCCCATCTCATGTATTAGTCATGTCAGCTTTGACACTGCGCACGCGACGGCACCCGACCCGTTGCAGACCCCCAGACATATGGAAAGCTGACGCTCAACGTGGAGTTAGCCGGCGCGGCGCGGCTTCATCGCGCAGCGTCCGTGTTGATGGATGGGTTAGGGAAATCCTGCAAAACCTCGTGAACAACCTGATAGACGCGGCCCAGTCATGGC
TCGCCCCCCTGCCCTCCCCTGGAGCCGCCCGAGATCGAGGCGGCTTTTTTCTCGAGCATCGCCACTTCCGGCGAGGCAGTACCGCGCACCAGCTCGCGCACGTCGAGCTGCAGCATCGTCACTTCCGGCGAGGCTGGCCACGTCCTGGCCACGTCCTGGCCACGGTCGACCATCGCCACATCCAACGATGCCCCGAGGGCCCCATCGCCACTTCCGACGATGAGATCCGCTCTTTGACATTTGAGGGGCCAAGCTGCGGGGGATTCTCCCGGCCGGCGGCCGCGAGAAGGGGTTCTAAGCCGGAACCGCCGAAAATTCCGTCAGCCGATCAACGTGGCTTGTCCCGCGCCCGGTCGATGGGGTAGACCCAACAGTCGTGTCACTAGCCGCCATTTCGATCACGGCAATGCCAGCCGGACGTCACGTCCAGATTGTTCCGGTCTGGATGAGGCCGACTGACGTCTCGGATGACGGGTGGCATACAACTGCTGTGAGTCCTGCAGGGGGGCAGCTGCCTGACCGGACGGCGAGCATCAGCCCATCTCATGTATTAGTCATGTCAGCTTTGACACTGCGCACGCGACGGCACCCGACCCGTTGCAGACCCCCAGACATATGGAAAGCTGACGCTCAACGTGGAGTTAGCCGGCGCGGCGCGGCTTCATCGCGCAGCGTCCGTGTTGATGGATGGGTTAGGGAAATCCTGCAAAACCTCGTGAACAACCTGATAGACGCGGCCCAGTCATGGC
AT-rich region
The information of repeat sequences

Motif CATCGCCACTTCCGRCGAKG

StartP-valueSite
2031.57e-12CCGAGGGCCCCATCGCCACTTCCGACGATGAGATCCGCTC
571.77e-11TTTTCTCGAGCATCGCCACTTCCGGCGAGGCAGTACCGCG
1142.41e-11CGAGCTGCAGCATCGTCACTTCCGGCGAGGCTGGCCACGT
1713.47e-11CACGGTCGACCATCGCCACATCCAACGATGCCCCGAGGGC

Motif KCCCDGHTGATGGRTKRGWYABRDCAGYYBTGHVA

StartP-valueSite
5372.78e-14GCGAGCATCAGCCCATCTCATGTATTAGTCATGTCAGCTTTGACACTGCGCACGC
3487.60e-14CTTGTCCCGCGCCCGGTCGATGGGGTAGACCCAACAGTCGTGTCACTAGCCGCCA
6751.26e-13TCGCGCAGCGTCCGTGTTGATGGATGGGTTAGGGAAATCCTGCAAAACCTCGTGA
4622.31e-13CCGACTGACGTCTCGGATGACGGGTGGCATACAACTGCTGTGAGTCCTGCAGGGG

Motif GMTCRASGYGGMKTKW

StartP-valueSite
3276.42e-10TCCGTCAGCCGATCAACGTGGCTTGTCCCGCGCCCG
339.40e-09AGCCGCCCGAGATCGAGGCGGCTTTTTTCTCGAGCA
6291.28e-08GAAAGCTGACGCTCAACGTGGAGTTAGCCGGCGCGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000560 100.0 749 0 0 1 749 1 749 0.0 1384
pORI00000196 92.771 83 6 0 206 288 1144 1062 2.52e-28 121