RefSeq NC_002698
DoriC accession number pORI00000248
OriC length 1122 nt
OriC AT content 0.5045
The location of oriC region 210012..211133 nt
Browse in NCBI
OriC map
OriC sequences
AAGTGACCTCCTCAGAATAATCCGGCACGCGCCGGAGGCATTCGCACGCCTGAAGCCCGCCAGTGCACAAAAAATCAGCGCTACATACAAAAAACAACCTCATCATCCACCTTCTGGTGCATCCGGTCCCCCCTGTTTTTGATACAAAACACGCCTCACAGACGGGGAATTTTGCTTATCCACATTAAACTGCAAGGGACTTCACCATAAGGTTACAACCGTTCACGTCATAAAGCGCCAGACGTCAACCCTACAGGGTGCAATGTATCTTTTAAACACCTGTTTATATCTCCTTTAAACTACTTAATTACATTCATTTAAAAAGAAAACTTGTTCACTGCCTGTCCTGTGGACAGACAGATATGCACCTCCCACCGCAAGCGGCGGGCCCCAACCGAAGCCGGTTTAGTTACAACATGCAAACATAAACCCCTAAAAAACCCAAGTCCAACGCAGAACTGAAACCACAACGCCCCCCCTCATAACTGAAAAGCGCCGCCGCCCCCGCCCAAAGGGCGGGAACAGAGTCGCTTTTAATTATGAATGTTGTAACTACAGCATCATCGCTGTCAGTCTTCTGGCTGGACGTATCGAGTACACGCTCGTAAGCGGCCCTCACGGCCCGCTAACGCGGAGATACGCCCCGACTTCGGGTAAAACCCTCGTCGGGACCACTCCGACCGCGCACAGAAGCTCTATCATGGCTGAAAACGGGTATGGCTTGGCAGGGCTGGGGGATGGGTAAGGTGAAATCTGTCAATCAGTACCGGCTGACGCCGGGCTTCGGCGGTTTTACTCCGGTATCACATGTAACCACAGCGTGCCGCCTTCCATGCCGCTGGCGCGGCATCAGAATAATACAAGCAGCATTTAATGCATTTGCAAAAGTGTGAGTAATATTAAGTGGTCGTTTCAGGGATATCGTTAAGACTTGAGCGATAGGAATTAAAACCCCAAAAAGATTAAAAAAACACCACAAAACGGATGTTTCTTCAACACCACTTTTGCTCCATATGAACGGAACCGACGATTAAACTGGATGGCTCTGATTGATTCAGGGTATGAATGGCGGTTTTTTGCTCCGTTTCCCTCAAAATGGACGCAACTTCCCCTCTGCGGCTC
AAGTGACCTCCTCAGAATAATCCGGCACGCGCCGGAGGCATTCGCACGCCTGAAGCCCGCCAGTGCACAAAAAATCAGCGCTACATACAAAAAACAACCTCATCATCCACCTTCTGGTGCATCCGGTCCCCCCTGTTTTTGATACAAAACACGCCTCACAGACGGGGAATTTTGCTTATCCACATTAAACTGCAAGGGACTTCACCATAAGGTTACAACCGTTCACGTCATAAAGCGCCAGACGTCAACCCTACAGGGTGCAATGTATCTTTTAAACACCTGTTTATATCTCCTTTAAACTACTTAATTACATTCATTTAAAAAGAAAACTTGTTCACTGCCTGTCCTGTGGACAGACAGATATGCACCTCCCACCGCAAGCGGCGGGCCCCAACCGAAGCCGGTTTAGTTACAACATGCAAACATAAACCCCTAAAAAACCCAAGTCCAACGCAGAACTGAAACCACAACGCCCCCCCTCATAACTGAAAAGCGCCGCCGCCCCCGCCCAAAGGGCGGGAACAGAGTCGCTTTTAATTATGAATGTTGTAACTACAGCATCATCGCTGTCAGTCTTCTGGCTGGACGTATCGAGTACACGCTCGTAAGCGGCCCTCACGGCCCGCTAACGCGGAGATACGCCCCGACTTCGGGTAAAACCCTCGTCGGGACCACTCCGACCGCGCACAGAAGCTCTATCATGGCTGAAAACGGGTATGGCTTGGCAGGGCTGGGGGATGGGTAAGGTGAAATCTGTCAATCAGTACCGGCTGACGCCGGGCTTCGGCGGTTTTACTCCGGTATCACATGTAACCACAGCGTGCCGCCTTCCATGCCGCTGGCGCGGCATCAGAATAATACAAGCAGCATTTAATGCATTTGCAAAAGTGTGAGTAATATTAAGTGGTCGTTTCAGGGATATCGTTAAGACTTGAGCGATAGGAATTAAAACCCCAAAAAGATTAAAAAAACACCACAAAACGGATGTTTCTTCAACACCACTTTTGCTCCATATGAACGGAACCGACGATTAAACTGGATGGCTCTGATTGATTCAGGGTATGAATGGCGGTTTTTTGCTCCGTTTCCCTCAAAATGGACGCAACTTCCCCTCTGCGGCTC
AT-rich region
The information of repeat sequences

Motif SMTBAAAMYGGATGBNDCTT

StartP-valueSite
9743.35e-09TAAAAAAACACCACAAAACGGATGTTTCTTCAACACCACT
10293.67e-09CGGAACCGACGATTAAACTGGATGGCTCTGATTGATTCAG
10896.01e-09GCTCCGTTTCCCTCAAAATGGACGCAACTTCCCCTCTGCG
1838.49e-09TGCTTATCCACATTAAACTGCAAGGGACTTCACCATAAGG
7042.26e-08CTCTATCATGGCTGAAAACGGGTATGGCTTGGCAGGGCTG

Motif TTVWAAMNACARCNTSHTCVCTBHCHKTCYKSTGG

StartP-valueSite
5474.48e-17ATTATGAATGTTGTAACTACAGCATCATCGCTGTCAGTCTTCTGGCTGGACGTAT
3184.40e-15TTACATTCATTTAAAAAGAAAACTTGTTCACTGCCTGTCCTGTGGACAGACAGAT
8083.34e-13CCGGTATCACATGTAACCACAGCGTGCCGCCTTCCATGCCGCTGGCGCGGCATCA
861.11e-12CAGCGCTACATACAAAAAACAACCTCATCATCCACCTTCTGGTGCATCCGGTCCC

Motif GSCGGTTT

StartP-valueSite
10686.57e-06GGGTATGAATGGCGGTTTTTTGCTCCGT
7866.57e-06GCCGGGCTTCGGCGGTTTTACTCCGGTA
4001.52e-05CCCAACCGAAGCCGGTTTAGTTACAACA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000248 100.0 1122 0 0 1 1122 1 1122 0.0 2073
pORI00000085 92.651 381 23 5 472 850 522 899 0.0 544
pORI00000019 93.664 363 21 2 1 362 1 362 0.0 542
pORI00000021 92.011 363 28 1 1 362 1 363 0.0 508