RefSeq NC_016966
DoriC accession number pORI00000085
OriC length 988 nt
OriC AT content 0.4767
The location of oriC region 178222..179209 nt
Browse in NCBI
OriC map
OriC sequences
CATTCCTTCTTTAAAAAATCCGGCCGGCGCCGGAGGCTTTCGCACGCCTGTTGGCCGGCTACTACGTATTATCTTATCTTCAGGCCTGCATTCCTCACCATAATTCCGGTCTTCCTGGCGTCAACGTGGCCTTAAATGTTATCGCCGGCGTCACTTCTGACGGCCGATTTCTGTTATCCACATATAACTGCAAGGGAGTATTTCATATAGCGCTAACCGATGTTTTCTCAAAGCGCTGCTCGTCGTCCTTTCAGGGCGCGTGGTTCCTTTTAAACATCAGCTCTGTATCTCTTTTAAAGATCCTTTAATAAATCCTGTAAACACATAACCTGTTCATCGCCTGCCCTGTGGACAGGCTGCGGAGAATGCCCGCCCTTGCAGCGACCAGACGGTCGCGCCGGTTCGGCAACATCAGAGAGAGCTCCCATCGCTTCGCGACGGGCCCCGACCGGAGAACCACATTAGTTACAGCATTCATAAGGAAGTTAATCATAAAACCGGCGCCGGTTTGCCGGCCAGGTGCCCCTCCCCACCACTGAAAAGCGCCGCCGCCCCCGGCCCAAAGGGCCGGAACAGAGTCGCTTTTAATTATGAATGTTGTAACTACATCTTCATCGCTGTCAGTCTTCTCGCTGGAAGTTCTCAGTACACGCTCGTAAGCGGCCCTCACGGCCCGCTAACGCGGAGATACGCCCCGACTTCGGGTAAACCCTCGTCGGGACCACTCCGACCGCGCACAGAAGCTCTCTCATGGCTGAAAGCGGGTATGGTCTGGCAGGGCTGGGGATGGGTAAGGTGAAATCTATCAATCAGTACCGGCTTACGCCGGGCTTCGGCGGTTTTACTCCTGTATCATATGAAACAACAGAGTGCCGCCTTCCATGCCGCTGATGCGGCATATCCTGGTAACGATATCTGAATTGTTATACATGTGTATATACGTGGTAATGACAAAAATAGGACAAGTTAAAAATTTACAGGCGATGCA
CATTCCTTCTTTAAAAAATCCGGCCGGCGCCGGAGGCTTTCGCACGCCTGTTGGCCGGCTACTACGTATTATCTTATCTTCAGGCCTGCATTCCTCACCATAATTCCGGTCTTCCTGGCGTCAACGTGGCCTTAAATGTTATCGCCGGCGTCACTTCTGACGGCCGATTTCTGTTATCCACATATAACTGCAAGGGAGTATTTCATATAGCGCTAACCGATGTTTTCTCAAAGCGCTGCTCGTCGTCCTTTCAGGGCGCGTGGTTCCTTTTAAACATCAGCTCTGTATCTCTTTTAAAGATCCTTTAATAAATCCTGTAAACACATAACCTGTTCATCGCCTGCCCTGTGGACAGGCTGCGGAGAATGCCCGCCCTTGCAGCGACCAGACGGTCGCGCCGGTTCGGCAACATCAGAGAGAGCTCCCATCGCTTCGCGACGGGCCCCGACCGGAGAACCACATTAGTTACAGCATTCATAAGGAAGTTAATCATAAAACCGGCGCCGGTTTGCCGGCCAGGTGCCCCTCCCCACCACTGAAAAGCGCCGCCGCCCCCGGCCCAAAGGGCCGGAACAGAGTCGCTTTTAATTATGAATGTTGTAACTACATCTTCATCGCTGTCAGTCTTCTCGCTGGAAGTTCTCAGTACACGCTCGTAAGCGGCCCTCACGGCCCGCTAACGCGGAGATACGCCCCGACTTCGGGTAAACCCTCGTCGGGACCACTCCGACCGCGCACAGAAGCTCTCTCATGGCTGAAAGCGGGTATGGTCTGGCAGGGCTGGGGATGGGTAAGGTGAAATCTATCAATCAGTACCGGCTTACGCCGGGCTTCGGCGGTTTTACTCCTGTATCATATGAAACAACAGAGTGCCGCCTTCCATGCCGCTGATGCGGCATATCCTGGTAACGATATCTGAATTGTTATACATGTGTATATACGTGGTAATGACAAAAATAGGACAAGTTAAAAATTTACAGGCGATGCA
AT-rich region
The information of repeat sequences

Motif CTTTTAAANAT

StartP-valueSite
2915.23e-07CTCTGTATCTCTTTTAAAGATCCTTTAATAA
2677.31e-07CGCGTGGTTCCTTTTAAACATCAGCTCTGTA
91.22e-06CATTCCTTCTTTAAAAAATCCGGCCGGCG
5821.78e-06AACAGAGTCGCTTTTAATTATGAATGTTGTA

Motif ATAWRBVHKKTAAWSAYAWAA

StartP-valueSite
9366.33e-11ATACATGTGTATATACGTGGTAATGACAAAAATAGGACAAG
4771.21e-10TACAGCATTCATAAGGAAGTTAATCATAAAACCGGCGCCGG
3082.51e-10AGATCCTTTAATAAATCCTGTAAACACATAACCTGTTCATC

Motif AACAWCAGAGWG

StartP-valueSite
8611.18e-07TATCATATGAAACAACAGAGTGCCGCCTTCCA
4081.18e-07CCGGTTCGGCAACATCAGAGAGAGCTCCCATC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000085 100.0 988 0 0 1 988 1 988 0.0 1825
pORI00000248 92.651 381 23 5 522 899 472 850 0.0 544