RefSeq | NC_018017.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Accession number | NC_018017.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Lineage | bacteria, firmicutes, clostridia, clostridiales, peptococcaceae, desulfitobacterium. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | ORI96010231 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 365 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.690411 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 215..579 nt | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaa
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
-ACAGCTATTGCACCTCCTTCAAGGGAAAAAACAAATAAAAATTGCACATCTCTAGAGATTATACTCTAACTTTTTTGGCCCTGTCAAGCAGAGTATATAAGAGTATGCAATAATATTGTGGATAACTTTACCCTTAAAAAAGTTATCCACTTGTTAATAAATTTTTATTAGGACTAACTTCCTGTTGATAACCCCAAAAAAAATTGGTATTATGATTTTACACCGCCTTTAAATACCACGCTTTCGCTTAAATCATTTGTACACAGCAATAATTTTATTGAGTTATCCACAAATGTGCATAAGTTTGTGTATAACTTTTTTATTGTCATATTTTCTACATAATTAGACAAAGGGAGGTCCACTGAdnaA
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC   CtrA binding motif Fis binding site IHF binding site |
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The information of repeat sequences |
Motif TGTGBATAAC
Motif TRCACMKC
Motif GWTATCCAC
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Distribution of genes on leading or lagging strand | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Distribution of nucleotide on leading or lagging strand | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The result of BLAST |
Download
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