RefSeq NZ_LT549891.1
DoriC accession number aORI10010328
OriC length 819 nt
OriC AT content 0.4969
The location of oriC region 2550371..0 nt
Browse in NCBI
OriC map
OriC sequences
TTTACTTCTTTGTATCTCCCGGAAGGGGGTGCGCAATCCCCAACCCCTTTGTTTCGACTGGAACCTGGAAGGGGTCCAGGGTCAGAACCAATGTGGATGAGTGGGAAGAACAGAGGCCTCTGATGGGTGATAAGACTTTCTGAAGAGAGATCCGACGGTTTTTCCTTGATAATCGGTCCTGAGCACCCTGGTTAGATGACCTCCTCCGGGTATCCAGGAAGACCTCCCGGTCCGGGCAGGGCATCTTCCCGGGGATGGGGATCAGGTTTCTCCCAGGGACCCCTCCCTTGTGTATCCCAGGTAGCCATAATTTATCAGCCAGTCTGGTGTGAGCTCCCCTCCTCTGTACACAGCCGGCAAAATCAACGTAAATTCCTGATCAGGTCATCCAACCTGGTTTGTAATTCAATAAACCGGGTTTATTGTCATCTTTTTGCATTTTCTTCCCAGTTTCGAACTTTTCTTGTTTTCTGGTGCTTTCTCTGGCTCTTTTTCTCTTCCAGTACTTCTACGATATATCTTTATATCTTGAATTTCAGAGGTACACATGAATATTATCATCACGTTTGCATGCACGAGACAGCCCTGTATCATCATCACTCTCCACTGGAAACAAAGGGGTCGGGGCGTCACCGGGATCACCACTCTGCTATTCTCCACCATTTCACTATCACTCCACAGCCCTCACGGGTCTTCTGCCTGCGATCAACCCCCTCTAAGTTCCACTGGAAACGAAGGGGTTATCTGCCTCAAGAACGATCATATTAAGAGCCCGCGACACGAAAATTTCCTGTCCTGGCAACCTCCCCCGGTGACATC
TTTACTTCTTTGTATCTCCCGGAAGGGGGTGCGCAATCCCCAACCCCTTTGTTTCGACTGGAACCTGGAAGGGGTCCAGGGTCAGAACCAATGTGGATGAGTGGGAAGAACAGAGGCCTCTGATGGGTGATAAGACTTTCTGAAGAGAGATCCGACGGTTTTTCCTTGATAATCGGTCCTGAGCACCCTGGTTAGATGACCTCCTCCGGGTATCCAGGAAGACCTCCCGGTCCGGGCAGGGCATCTTCCCGGGGATGGGGATCAGGTTTCTCCCAGGGACCCCTCCCTTGTGTATCCCAGGTAGCCATAATTTATCAGCCAGTCTGGTGTGAGCTCCCCTCCTCTGTACACAGCCGGCAAAATCAACGTAAATTCCTGATCAGGTCATCCAACCTGGTTTGTAATTCAATAAACCGGGTTTATTGTCATCTTTTTGCATTTTCTTCCCAGTTTCGAACTTTTCTTGTTTTCTGGTGCTTTCTCTGGCTCTTTTTCTCTTCCAGTACTTCTACGATATATCTTTATATCTTGAATTTCAGAGGTACACATGAATATTATCATCACGTTTGCATGCACGAGACAGCCCTGTATCATCATCACTCTCCACTGGAAACAAAGGGGTCGGGGCGTCACCGGGATCACCACTCTGCTATTCTCCACCATTTCACTATCACTCCACAGCCCTCACGGGTCTTCTGCCTGCGATCAACCCCCTCTAAGTTCCACTGGAAACGAAGGGGTTATCTGCCTCAAGAACGATCATATTAAGAGCCCGCGACACGAAAATTTCCTGTCCTGGCAACCTCCCCCGGTGACATC
TTTACTTCTTTGTATCTCCCGGAAGGGGGTGCGCAATCCCCAACCCCTTTGTTTCGACTGGAACCTGGAAGGGGTCCAGGGTCAGAACCAATGTGGATGAGTGGGAAGAACAGAGGCCTCTGATGGGTGATAAGACTTTCTGAAGAGAGATCCGACGGTTTTTCCTTGATAATCGGTCCTGAGCACCCTGGTTAGATGACCTCCTCCGGGTATCCAGGAAGACCTCCCGGTCCGGGCAGGGCATCTTCCCGGGGATGGGGATCAGGTTTCTCCCAGGGACCCCTCCCTTGTGTATCCCAGGTAGCCATAATTTATCAGCCAGTCTGGTGTGAGCTCCCCTCCTCTGTACACAGCCGGCAAAATCAACGTAAATTCCTGATCAGGTCATCCAACCTGGTTTGTAATTCAATAAACCGGGTTTATTGTCATCTTTTTGCATTTTCTTCCCAGTTTCGAACTTTTCTTGTTTTCTGGTGCTTTCTCTGGCTCTTTTTCTCTTCCAGTACTTCTACGATATATCTTTATATCTTGAATTTCAGAGGTACACATGAATATTATCATCACGTTTGCATGCACGAGACAGCCCTGTATCATCATCACTCTCCACTGGAAACAAAGGGGTCGGGGCGTCACCGGGATCACCACTCTGCTATTCTCCACCATTTCACTATCACTCCACAGCCCTCACGGGTCTTCTGCCTGCGATCAACCCCCTCTAAGTTCCACTGGAAACGAAGGGGTTATCTGCCTCAAGAACGATCATATTAAGAGCCCGCGACACGAAAATTTCCTGTCCTGGCAACCTCCCCCGGTGACATC
ORB     AT-rich region
The information of repeat sequences

Motif SGAAGGGG

StartP-valueSite
675.34e-06ACTGGAACCTGGAAGGGGTCCAGGGTCA
215.34e-06TGTATCTCCCGGAAGGGGGTGCGCAATC
7331.21e-05CCACTGGAAACGAAGGGGTTATCTGCCT
2532.44e-05ATCTTCCCGGGGATGGGGATCAGGTTTC
6143.12e-05CCACTGGAAACAAAGGGGTCGGGGCGTC

Motif TCSACTGGAAA

StartP-valueSite
7223.46e-07CCCTCTAAGTTCCACTGGAAACGAAGGGGTT
6033.46e-07ATCATCACTCTCCACTGGAAACAAAGGGGTC
541.27e-06CCCCTTTGTTTCGACTGGAACCTGGAAGGGG
7754.11e-06TTAAGAGCCCGCGACACGAAAATTTCCTGTC

Motif CAGGGMAHCCTCCC

StartP-valueSite
2371.40e-07CCGGTCCGGGCAGGGCATCTTCCCGGGGATGGGG
2152.61e-07TCCGGGTATCCAGGAAGACCTCCCGGTCCGGGCA
2742.97e-07AGGTTTCTCCCAGGGACCCCTCCCTTGTGTATCC
7958.97e-07AATTTCCTGTCCTGGCAACCTCCCCCGGTGACAT
3811.47e-06AATTCCTGATCAGGTCATCCAACCTGGTTTGTAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010328 100.0 819 0 0 1 819 1 819 0.0 1513
aORI10010327 97.706 654 6 8 174 819 591 1243 0.0 1116
aORI10010327 97.778 585 6 7 1 579 1 584 0.0 1002
aORI10010190 93.528 479 31 0 341 819 1 479 0.0 713
aORI10010039 75.938 320 55 17 510 819 606 913 4.77e-36 145