RefSeq NC_009051.1
DoriC accession number aORI10010039
OriC length 913 nt
OriC AT content 0.4995
The location of oriC region 2477657..468 nt
Browse in NCBI
OriC map
OriC sequences
AGGTTCTTCCAGTACCCCTGTACCATGTATTTTACTTGATTCTATCCCCCATCCGGGAGAGTTCAATCCCCGACCCCTTTGTTTCGCGTGGAGAAAAGAAGGACGCCGCGGGCCAGGGATGGAGGAGGGCAGAGGGGGGAGGAACCTGAATACAGGATTTGCGGAGAGGAAACCTGTTAACCCACAAGGATTGACAGGATCGTCTTCATGAAACCGATCGGATGAAACCCGGGTGCCCGGCAAAATGCTCTCCCGCGAACCGATCGGACCTCCCGATCCGTTCTGCACCGGGACTTCCCCGGGCTCTCTTCCGGCGGATCGATCGATCGGAGAGGATGCCCGATCGGGTTCCTGCCGGAGAAGATGTACCCTGCCCTGGTTTGCTCTTTTGTTCCCTCTCGGTATCCTGTTTTCCGTACCCTGCTCTCTTTTCCCTTTTTACTCTTTTTATCCTTTCTTCTTGCTCTGTTTCATTTTTTACCCCTTTTTGAATTCCTTTGCCCTTTTTTACTCCTTTTTCTTCCTCTGTTTATCCCCGATTTTCTTTTAATCTCTCGGATTTCTTTTTCCTTTTCTCTCCTCGCTTTGTTTTTTCTCTAAATTAATACGGTAAACCTTTATACCTTGAATTTCAGAGGTACACATGACTATTGTCATCGGTTTTGAATGAACGATACACACGGTGTATCGTCATCAGGTTTCCACTCGAAACAAAGGGGTCGGGGCGATCCCGTCCGGGTCCCTTGATCTGCCCTCCAAGACTCCCCCCAACTCGACCGGTTTATCGGGATCTCCCGGCGATCCAATGCTCGAAGTTCCACTGGAAACGAAGGGGTTATCTGTCCCTAAAGCGATCATATTAAGAGACCTCGACACGAAAATTTCCTGCCCTGCTTCCCTCCTCGGTGACATC
AGGTTCTTCCAGTACCCCTGTACCATGTATTTTACTTGATTCTATCCCCCATCCGGGAGAGTTCAATCCCCGACCCCTTTGTTTCGCGTGGAGAAAAGAAGGACGCCGCGGGCCAGGGATGGAGGAGGGCAGAGGGGGGAGGAACCTGAATACAGGATTTGCGGAGAGGAAACCTGTTAACCCACAAGGATTGACAGGATCGTCTTCATGAAACCGATCGGATGAAACCCGGGTGCCCGGCAAAATGCTCTCCCGCGAACCGATCGGACCTCCCGATCCGTTCTGCACCGGGACTTCCCCGGGCTCTCTTCCGGCGGATCGATCGATCGGAGAGGATGCCCGATCGGGTTCCTGCCGGAGAAGATGTACCCTGCCCTGGTTTGCTCTTTTGTTCCCTCTCGGTATCCTGTTTTCCGTACCCTGCTCTCTTTTCCCTTTTTACTCTTTTTATCCTTTCTTCTTGCTCTGTTTCATTTTTTACCCCTTTTTGAATTCCTTTGCCCTTTTTTACTCCTTTTTCTTCCTCTGTTTATCCCCGATTTTCTTTTAATCTCTCGGATTTCTTTTTCCTTTTCTCTCCTCGCTTTGTTTTTTCTCTAAATTAATACGGTAAACCTTTATACCTTGAATTTCAGAGGTACACATGACTATTGTCATCGGTTTTGAATGAACGATACACACGGTGTATCGTCATCAGGTTTCCACTCGAAACAAAGGGGTCGGGGCGATCCCGTCCGGGTCCCTTGATCTGCCCTCCAAGACTCCCCCCAACTCGACCGGTTTATCGGGATCTCCCGGCGATCCAATGCTCGAAGTTCCACTGGAAACGAAGGGGTTATCTGTCCCTAAAGCGATCATATTAAGAGACCTCGACACGAAAATTTCCTGCCCTGCTTCCCTCCTCGGTGACATC
AGGTTCTTCCAGTACCCCTGTACCATGTATTTTACTTGATTCTATCCCCCATCCGGGAGAGTTCAATCCCCGACCCCTTTGTTTCGCGTGGAGAAAAGAAGGACGCCGCGGGCCAGGGATGGAGGAGGGCAGAGGGGGGAGGAACCTGAATACAGGATTTGCGGAGAGGAAACCTGTTAACCCACAAGGATTGACAGGATCGTCTTCATGAAACCGATCGGATGAAACCCGGGTGCCCGGCAAAATGCTCTCCCGCGAACCGATCGGACCTCCCGATCCGTTCTGCACCGGGACTTCCCCGGGCTCTCTTCCGGCGGATCGATCGATCGGAGAGGATGCCCGATCGGGTTCCTGCCGGAGAAGATGTACCCTGCCCTGGTTTGCTCTTTTGTTCCCTCTCGGTATCCTGTTTTCCGTACCCTGCTCTCTTTTCCCTTTTTACTCTTTTTATCCTTTCTTCTTGCTCTGTTTCATTTTTTACCCCTTTTTGAATTCCTTTGCCCTTTTTTACTCCTTTTTCTTCCTCTGTTTATCCCCGATTTTCTTTTAATCTCTCGGATTTCTTTTTCCTTTTCTCTCCTCGCTTTGTTTTTTCTCTAAATTAATACGGTAAACCTTTATACCTTGAATTTCAGAGGTACACATGACTATTGTCATCGGTTTTGAATGAACGATACACACGGTGTATCGTCATCAGGTTTCCACTCGAAACAAAGGGGTCGGGGCGATCCCGTCCGGGTCCCTTGATCTGCCCTCCAAGACTCCCCCCAACTCGACCGGTTTATCGGGATCTCCCGGCGATCCAATGCTCGAAGTTCCACTGGAAACGAAGGGGTTATCTGTCCCTAAAGCGATCATATTAAGAGACCTCGACACGAAAATTTCCTGCCCTGCTTCCCTCCTCGGTGACATC
ORB     AT-rich region
The information of repeat sequences

Motif RSAGGATSSYCDHCVGGGDWCCDAYCGGANNAVABG

StartP-valueSite
1945.39e-14ACAAGGATTGACAGGATCGTCTTCATGAAACCGATCGGATGAAACCCGGGTGCCCG
3311.86e-13GATCGATCGGAGAGGATGCCCGATCGGGTTCCTGCCGGAGAAGATGTACCCTGCCC
1212.88e-13GGCCAGGGATGGAGGAGGGCAGAGGGGGGAGGAACCTGAATACAGGATTTGCGGAG
6823.42e-13CGATACACACGGTGTATCGTCATCAGGTTTCCACTCGAAACAAAGGGGTCGGGGCG
2402.44e-12CGGGTGCCCGGCAAAATGCTCTCCCGCGAACCGATCGGACCTCCCGATCCGTTCTG

Motif GAVAVGAAR

StartP-valueSite
8241.44e-06AGTTCCACTGGAAACGAAGGGGTTATCTG
932.42e-06TTCGCGTGGAGAAAAGAAGGACGCCGCGG
8726.13e-06AAGAGACCTCGACACGAAAATTTCCTGCC
1648.91e-06AGGATTTGCGGAGAGGAAACCTGTTAACC

Motif TKYCCTTTTTTACTCYTTTTT

StartP-valueSite
4994.68e-12TGAATTCCTTTGCCCTTTTTTACTCCTTTTTCTTCCTCTGT
4699.98e-10TCTTGCTCTGTTTCATTTTTTACCCCTTTTTGAATTCCTTT
4309.98e-10CCTGCTCTCTTTTCCCTTTTTACTCTTTTTATCCTTTCTTC
3722.81e-09AGATGTACCCTGCCCTGGTTTGCTCTTTTGTTCCCTCTCGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010039 100.0 913 0 0 1 913 1 913 0.0 1687
aORI10010190 76.489 319 55 16 606 913 170 479 2.46e-39 156
aORI10010328 75.862 319 57 16 606 913 510 819 5.33e-36 145
aORI10010327 75.862 319 57 16 606 913 934 1243 5.33e-36 145