RefSeq NZ_CP016070.1
DoriC accession number aORI10010308
OriC length 873 nt
OriC AT content 0.5384
The location of oriC region 1971870..459 nt
Browse in NCBI
OriC map
OriC sequences
TATGACCCACCTTGTGCGTCCCGGGGCTTGAAATCTCCGGACACGTCTACCCGTGCAGGCTGTAACGCCTTAAGTCTACAGGCAGAGCGGGCGACTGGTCCGGATCAGCAGTCCGCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCCGAGAAACAGCTGCGATTGTTTTCGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGAGTGTTCAGGACAGCACCCCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGCGTGGTGACGGGTTCAGAAACAGGATTCTTTTCTTGGATAACTTAGTTTATCAGTAAATAAGAATAGTATAGGCTGTTTTCTTTACTGGTTTACGGATACTGTTTTCACATCATCACCATAAATCTTGCCTAGTTCAGTAGCGGGGTGCGCCCACCCCGTTTCGCCGTTCCACACGAAACGAAGGGGTGGGGGGCTAGGGAGGCATCACGTTTTCTCCCAGTCGTTAAGCCCTCCATATCCTGAAAATATTGTTTCGGTAACTGATCCCCTGGCGAACAATCCGTTTTACCGGCCGATCAGCGTCGTTTGGCCCGATCGGTTTCGTTCTTGTTCTGATCCGGTGGACCGATACCTTTTTGTCCGTCCCAGATCCGTGATTTCATCTGCATCAACTGGACAGGGGAGTGCCCGGGGTGACCCCTCTATTTGCCCGGAGCGGGGCGCTGCGATGCGTTTCCACCCGGTATCCTCCTCTGTCCCACTCGAACCGGGGGACATGACTC
TATGACCCACCTTGTGCGTCCCGGGGCTTGAAATCTCCGGACACGTCTACCCGTGCAGGCTGTAACGCCTTAAGTCTACAGGCAGAGCGGGCGACTGGTCCGGATCAGCAGTCCGCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCCGAGAAACAGCTGCGATTGTTTTCGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGAGTGTTCAGGACAGCACCCCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGCGTGGTGACGGGTTCAGAAACAGGATTCTTTTCTTGGATAACTTAGTTTATCAGTAAATAAGAATAGTATAGGCTGTTTTCTTTACTGGTTTACGGATACTGTTTTCACATCATCACCATAAATCTTGCCTAGTTCAGTAGCGGGGTGCGCCCACCCCGTTTCGCCGTTCCACACGAAACGAAGGGGTGGGGGGCTAGGGAGGCATCACGTTTTCTCCCAGTCGTTAAGCCCTCCATATCCTGAAAATATTGTTTCGGTAACTGATCCCCTGGCGAACAATCCGTTTTACCGGCCGATCAGCGTCGTTTGGCCCGATCGGTTTCGTTCTTGTTCTGATCCGGTGGACCGATACCTTTTTGTCCGTCCCAGATCCGTGATTTCATCTGCATCAACTGGACAGGGGAGTGCCCGGGGTGACCCCTCTATTTGCCCGGAGCGGGGCGCTGCGATGCGTTTCCACCCGGTATCCTCCTCTGTCCCACTCGAACCGGGGGACATGACTC
TATGACCCACCTTGTGCGTCCCGGGGCTTGAAATCTCCGGACACGTCTACCCGTGCAGGCTGTAACGCCTTAAGTCTACAGGCAGAGCGGGCGACTGGTCCGGATCAGCAGTCCGCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCCGAGAAACAGCTGCGATTGTTTTCGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGAGTGTTCAGGACAGCACCCCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGCGTGGTGACGGGTTCAGAAACAGGATTCTTTTCTTGGATAACTTAGTTTATCAGTAAATAAGAATAGTATAGGCTGTTTTCTTTACTGGTTTACGGATACTGTTTTCACATCATCACCATAAATCTTGCCTAGTTCAGTAGCGGGGTGCGCCCACCCCGTTTCGCCGTTCCACACGAAACGAAGGGGTGGGGGGCTAGGGAGGCATCACGTTTTCTCCCAGTCGTTAAGCCCTCCATATCCTGAAAATATTGTTTCGGTAACTGATCCCCTGGCGAACAATCCGTTTTACCGGCCGATCAGCGTCGTTTGGCCCGATCGGTTTCGTTCTTGTTCTGATCCGGTGGACCGATACCTTTTTGTCCGTCCCAGATCCGTGATTTCATCTGCATCAACTGGACAGGGGAGTGCCCGGGGTGACCCCTCTATTTGCCCGGAGCGGGGCGCTGCGATGCGTTTCCACCCGGTATCCTCCTCTGTCCCACTCGAACCGGGGGACATGACTC
ORB     AT-rich region
The information of repeat sequences

Motif GTTCSASTBGAAMCNGDGBRVHTGG

StartP-valueSite
1256.80e-13GCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCG
5361.25e-10CCGTTTCGCCGTTCCACACGAAACGAAGGGGTGGGGGGCTAGGGA
8466.17e-10ATCCTCCTCTGTCCCACTCGAACCGGGGGACATGACTC
1642.24e-09GCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCC
2433.25e-09GGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGAT

Motif WTMAVDTATTBTHYCAGTAAHTDAKC

StartP-valueSite
4074.40e-12CTTTTCTTGGATAACTTAGTTTATCAGTAAATAAGAATAGTATAGG
6112.43e-11CTCCATATCCTGAAAATATTGTTTCGGTAACTGATCCCCTGGCGAA
2776.10e-11GATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGA
5743.49e-10CTAGGGAGGCATCACGTTTTCTCCCAGTCGTTAAGCCCTCCATATC

Motif CGATNSGTTT

StartP-valueSite
6832.54e-06TCGTTTGGCCCGATCGGTTTCGTTCTTGTT
8175.98e-06CGGGGCGCTGCGATGCGTTTCCACCCGGTA
6471.29e-05CCCTGGCGAACAATCCGTTTTACCGGCCGA
7171.83e-05TCCGGTGGACCGATACCTTTTTGTCCGTCC
2112.96e-05GAAACAGCTGCGATTGTTTTCGGTGAACCT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010308 100.0 873 0 0 1 873 1 873 0.0 1613
aORI10010309 94.616 873 44 3 1 871 1 872 0.0 1349
aORI10010271 100.0 28 0 0 536 563 771 798 3.18e-08 53
aORI10010144 100.0 28 0 0 536 563 578 605 3.18e-08 53