RefSeq NC_012029.1
DoriC accession number aORI10010144
OriC length 1002 nt
OriC AT content 0.503
The location of oriC region 2735073..779 nt
Browse in NCBI
OriC map
OriC sequences
CCTAACCTCCAGTCCTGTGTTCTCTCCCAGATACACTGTGCGGTGTGGTAACGCCCGATGCTGCGCATCCAGCGTGTGTACGGGGAATTACGATAGAATCCACGCCCCTCTCACTTAAGAACTGCGTCAGACACGGGCGATTTGGTGATATTCGGGTCGTGCAGTTGTTAACACGCGGGATATCGGTTGTTTACTTATTCGAGCTTATTTATATATTCTTAATAATCTGGAATTGGATATGGTAGATCGACGAGAGACGGGCTAACGGGAAACAAATCTTATTCTATTGATCTATCCCGGTGATCCATCTCGGTGATCCATCCTGTTGATCTAGCTCGTTCTGATTCTCTCCCCTCCCCCACCCCTTTGTTTCGACTGGAGACCGTTATCGGTGGAGGGGTGGATACGAGTGGTCGTGTCTCGGATGTAAATACGAGTGTTCAAACGATTTACCGTAACTACTACTAACAACAAAATAAATGATCGGGCTTTGTCGAGGGTACTGTTTTACAGACATTATAATAAAACTACCGCTATACTATATCCTCTTCTCACCCCCCTCCCCCACCAAATCCGAGTTCCACACGAAACGAAGGGGTGGGGGGTCAGGAGAAGACAAACAGATAATCCGAGTGGATAACCGGCACCGACTAGACGATCACGAGACTGAAACGGGGTGGAATCCGAGGACAGCTCCGAAAAACGAGTGGATCGCATTACGGCTGTCTGGACTCGAATCGAGACAATACACCCACGTTTCCCGTCCATCGAGTTTCCCCTCCTAACGTCTCGATCTCGCTGTCGATTTTGTCACTGATCTTGACCGACACGGTCCGTTTCGGGTCCAGAGAGCAACACTTTTGTACCCCGTATTCATCTGGTTCGACTGCATCAACTGGACATATTCGACCATAGTTCTGGTCGAATATCGACGTTTCAGGCCGAAATACGACCTCTGCCGCCGTTGCGCGGGCGACTTCCACCTGAAACAGAGGGGTTCCA
CCTAACCTCCAGTCCTGTGTTCTCTCCCAGATACACTGTGCGGTGTGGTAACGCCCGATGCTGCGCATCCAGCGTGTGTACGGGGAATTACGATAGAATCCACGCCCCTCTCACTTAAGAACTGCGTCAGACACGGGCGATTTGGTGATATTCGGGTCGTGCAGTTGTTAACACGCGGGATATCGGTTGTTTACTTATTCGAGCTTATTTATATATTCTTAATAATCTGGAATTGGATATGGTAGATCGACGAGAGACGGGCTAACGGGAAACAAATCTTATTCTATTGATCTATCCCGGTGATCCATCTCGGTGATCCATCCTGTTGATCTAGCTCGTTCTGATTCTCTCCCCTCCCCCACCCCTTTGTTTCGACTGGAGACCGTTATCGGTGGAGGGGTGGATACGAGTGGTCGTGTCTCGGATGTAAATACGAGTGTTCAAACGATTTACCGTAACTACTACTAACAACAAAATAAATGATCGGGCTTTGTCGAGGGTACTGTTTTACAGACATTATAATAAAACTACCGCTATACTATATCCTCTTCTCACCCCCCTCCCCCACCAAATCCGAGTTCCACACGAAACGAAGGGGTGGGGGGTCAGGAGAAGACAAACAGATAATCCGAGTGGATAACCGGCACCGACTAGACGATCACGAGACTGAAACGGGGTGGAATCCGAGGACAGCTCCGAAAAACGAGTGGATCGCATTACGGCTGTCTGGACTCGAATCGAGACAATACACCCACGTTTCCCGTCCATCGAGTTTCCCCTCCTAACGTCTCGATCTCGCTGTCGATTTTGTCACTGATCTTGACCGACACGGTCCGTTTCGGGTCCAGAGAGCAACACTTTTGTACCCCGTATTCATCTGGTTCGACTGCATCAACTGGACATATTCGACCATAGTTCTGGTCGAATATCGACGTTTCAGGCCGAAATACGACCTCTGCCGCCGTTGCGCGGGCGACTTCCACCTGAAACAGAGGGGTTCCA
CCTAACCTCCAGTCCTGTGTTCTCTCCCAGATACACTGTGCGGTGTGGTAACGCCCGATGCTGCGCATCCAGCGTGTGTACGGGGAATTACGATAGAATCCACGCCCCTCTCACTTAAGAACTGCGTCAGACACGGGCGATTTGGTGATATTCGGGTCGTGCAGTTGTTAACACGCGGGATATCGGTTGTTTACTTATTCGAGCTTATTTATATATTCTTAATAATCTGGAATTGGATATGGTAGATCGACGAGAGACGGGCTAACGGGAAACAAATCTTATTCTATTGATCTATCCCGGTGATCCATCTCGGTGATCCATCCTGTTGATCTAGCTCGTTCTGATTCTCTCCCCTCCCCCACCCCTTTGTTTCGACTGGAGACCGTTATCGGTGGAGGGGTGGATACGAGTGGTCGTGTCTCGGATGTAAATACGAGTGTTCAAACGATTTACCGTAACTACTACTAACAACAAAATAAATGATCGGGCTTTGTCGAGGGTACTGTTTTACAGACATTATAATAAAACTACCGCTATACTATATCCTCTTCTCACCCCCCTCCCCCACCAAATCCGAGTTCCACACGAAACGAAGGGGTGGGGGGTCAGGAGAAGACAAACAGATAATCCGAGTGGATAACCGGCACCGACTAGACGATCACGAGACTGAAACGGGGTGGAATCCGAGGACAGCTCCGAAAAACGAGTGGATCGCATTACGGCTGTCTGGACTCGAATCGAGACAATACACCCACGTTTCCCGTCCATCGAGTTTCCCCTCCTAACGTCTCGATCTCGCTGTCGATTTTGTCACTGATCTTGACCGACACGGTCCGTTTCGGGTCCAGAGAGCAACACTTTTGTACCCCGTATTCATCTGGTTCGACTGCATCAACTGGACATATTCGACCATAGTTCTGGTCGAATATCGACGTTTCAGGCCGAAATACGACCTCTGCCGCCGTTGCGCGGGCGACTTCCACCTGAAACAGAGGGGTTCCA
ORB     AT-rich region
The information of repeat sequences

Motif AAWMCGAGTGG

StartP-valueSite
7003.74e-07ACAGCTCCGAAAAACGAGTGGATCGCATTAC
6265.80e-07ACAAACAGATAATCCGAGTGGATAACCGGCA
4031.32e-06TGGAGGGGTGGATACGAGTGGTCGTGTCTCG
4301.53e-06CTCGGATGTAAATACGAGTGTTCAAACGATT
9877.28e-06CTTCCACCTGAAACAGAGGGGTTCCA

Motif TCGAMTVGAGAC

StartP-valueSite
7332.67e-07CTGTCTGGACTCGAATCGAGACAATACACCCA
3722.67e-07CCCCTTTGTTTCGACTGGAGACCGTTATCGGT
2474.24e-07ATATGGTAGATCGACGAGAGACGGGCTAACGG
9221.60e-06ATAGTTCTGGTCGAATATCGACGTTTCAGGCC

Motif GKTGATCYATC

StartP-valueSite
3124.82e-07GATCCATCTCGGTGATCCATCCTGTTGATCT
2994.82e-07GATCTATCCCGGTGATCCATCTCGGTGATCC
3252.43e-06GATCCATCCTGTTGATCTAGCTCGTTCTGAT
2862.98e-06ATCTTATTCTATTGATCTATCCCGGTGATCC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010144 100.0 1002 0 0 1 1002 1 1002 0.0 1851
aORI10010271 97.297 37 1 0 99 135 920 884 1.69e-11 64
aORI10010271 79.762 84 14 2 522 605 718 798 7.86e-10 58
aORI10010372 100.0 28 0 0 355 382 1194 1167 3.66e-08 53
aORI10010308 100.0 28 0 0 578 605 536 563 3.66e-08 53