RefSeq NZ_AP017558.1
DoriC accession number aORI10010271
OriC length 963 nt
OriC AT content 0.5348
The location of oriC region 1515046..1516008 nt
Browse in NCBI
OriC map
OriC sequences
TCATAACCCCCCTATTTCAGGTGGAGAACTCCGAGATGGCGCGTAGATGCCGCCGTTCAGCGGCGGATGGAGGCGTATTCATCGATGAAGCCACAACGGAGCGTCCAGATGATGCAATCGAAACAGATGTCCACATTCATTAAAAGCGTTGCCCTCTCCAGTAGAAAGGATGGTGTTGCAACCGGTGCCATCGGGTGCGTTGAACACATCGGACGGGGAGCTCCAGCGGAAACGAAGGGGTAGTCCACGAGGTGAAGTTGCGCGAACGAGGTTGAGAGACGGGGTGAGTGATGATCGAGCTGAGGGTTGACGTTCTTCCGCGCCTAAAGGCGCGGGTGTACTCCGTACTCTGTATTATGCTCTTCGTGCTCTGTATATTCTCATCAGAATCAAAGGCGGATCGGATCGGTTAGAGAACGGAGACGAAACCGACGCGACGCTCAGTGAAACCAGACGTCACGAGGCGAGTTAACTCGCCTCTGATATATGGTACCATAAATCACGATATATGGTACCATATATTTCGTACCGTGCGTCTTTTTCGTTCGTCCCCCCCACCCCTTCGTTTCGTGTGGAGACCGTGGCGGAGATCCCCAGTAGGGCGAGAGCGGGAATGATCAGTTAATAAGAAACGGATCCATATAGTTATTTTATAATAATATAGCGTTGTATTCTTTCTCTGGACTGGAATACGGGTCCGTTTTATGAGTATTGCATATAAAACCACCGCTATTATAAGCACCCCCCTCCCCCCACCCCTCCCACAGAGAGTTCCACACGAAACGAAGGGGTGGGGGGGTTCCCGTCAACGATACTTCATTCCGTGACCCCTGACTGGCCTCGGTTCCGTGACGGTCGAAAGACCGCGAAAGGGTGTCGTCGGCGTGTCTGACGCAGTTCTTAAGTGAGAGCGGCGTGGAACGTGCGATATATCCCCGCGCCGCCGCAGGGACGGAGGACAGG
TCATAACCCCCCTATTTCAGGTGGAGAACTCCGAGATGGCGCGTAGATGCCGCCGTTCAGCGGCGGATGGAGGCGTATTCATCGATGAAGCCACAACGGAGCGTCCAGATGATGCAATCGAAACAGATGTCCACATTCATTAAAAGCGTTGCCCTCTCCAGTAGAAAGGATGGTGTTGCAACCGGTGCCATCGGGTGCGTTGAACACATCGGACGGGGAGCTCCAGCGGAAACGAAGGGGTAGTCCACGAGGTGAAGTTGCGCGAACGAGGTTGAGAGACGGGGTGAGTGATGATCGAGCTGAGGGTTGACGTTCTTCCGCGCCTAAAGGCGCGGGTGTACTCCGTACTCTGTATTATGCTCTTCGTGCTCTGTATATTCTCATCAGAATCAAAGGCGGATCGGATCGGTTAGAGAACGGAGACGAAACCGACGCGACGCTCAGTGAAACCAGACGTCACGAGGCGAGTTAACTCGCCTCTGATATATGGTACCATAAATCACGATATATGGTACCATATATTTCGTACCGTGCGTCTTTTTCGTTCGTCCCCCCCACCCCTTCGTTTCGTGTGGAGACCGTGGCGGAGATCCCCAGTAGGGCGAGAGCGGGAATGATCAGTTAATAAGAAACGGATCCATATAGTTATTTTATAATAATATAGCGTTGTATTCTTTCTCTGGACTGGAATACGGGTCCGTTTTATGAGTATTGCATATAAAACCACCGCTATTATAAGCACCCCCCTCCCCCCACCCCTCCCACAGAGAGTTCCACACGAAACGAAGGGGTGGGGGGGTTCCCGTCAACGATACTTCATTCCGTGACCCCTGACTGGCCTCGGTTCCGTGACGGTCGAAAGACCGCGAAAGGGTGTCGTCGGCGTGTCTGACGCAGTTCTTAAGTGAGAGCGGCGTGGAACGTGCGATATATCCCCGCGCCGCCGCAGGGACGGAGGACAGG
TCATAACCCCCCTATTTCAGGTGGAGAACTCCGAGATGGCGCGTAGATGCCGCCGTTCAGCGGCGGATGGAGGCGTATTCATCGATGAAGCCACAACGGAGCGTCCAGATGATGCAATCGAAACAGATGTCCACATTCATTAAAAGCGTTGCCCTCTCCAGTAGAAAGGATGGTGTTGCAACCGGTGCCATCGGGTGCGTTGAACACATCGGACGGGGAGCTCCAGCGGAAACGAAGGGGTAGTCCACGAGGTGAAGTTGCGCGAACGAGGTTGAGAGACGGGGTGAGTGATGATCGAGCTGAGGGTTGACGTTCTTCCGCGCCTAAAGGCGCGGGTGTACTCCGTACTCTGTATTATGCTCTTCGTGCTCTGTATATTCTCATCAGAATCAAAGGCGGATCGGATCGGTTAGAGAACGGAGACGAAACCGACGCGACGCTCAGTGAAACCAGACGTCACGAGGCGAGTTAACTCGCCTCTGATATATGGTACCATAAATCACGATATATGGTACCATATATTTCGTACCGTGCGTCTTTTTCGTTCGTCCCCCCCACCCCTTCGTTTCGTGTGGAGACCGTGGCGGAGATCCCCAGTAGGGCGAGAGCGGGAATGATCAGTTAATAAGAAACGGATCCATATAGTTATTTTATAATAATATAGCGTTGTATTCTTTCTCTGGACTGGAATACGGGTCCGTTTTATGAGTATTGCATATAAAACCACCGCTATTATAAGCACCCCCCTCCCCCCACCCCTCCCACAGAGAGTTCCACACGAAACGAAGGGGTGGGGGGGTTCCCGTCAACGATACTTCATTCCGTGACCCCTGACTGGCCTCGGTTCCGTGACGGTCGAAAGACCGCGAAAGGGTGTCGTCGGCGTGTCTGACGCAGTTCTTAAGTGAGAGCGGCGTGGAACGTGCGATATATCCCCGCGCCGCCGCAGGGACGGAGGACAGG
ORB     AT-rich region
The information of repeat sequences

Motif AKAWAYGGWWCCATAWAKYW

StartP-valueSite
5053.42e-13ATAAATCACGATATATGGTACCATATATTTCGTACCGTGC
4833.65e-11CTCGCCTCTGATATATGGTACCATAAATCACGATATATGG
6282.25e-10TCAGTTAATAAGAAACGGATCCATATAGTTATTTTATAAT

Motif TCCASHVGAAASGAWGGKGT

StartP-valueSite
2221.25e-11GACGGGGAGCTCCAGCGGAAACGAAGGGGTAGTCCACGAG
7733.67e-11CACAGAGAGTTCCACACGAAACGAAGGGGTGGGGGGGTTC
1571.33e-10CGTTGCCCTCTCCAGTAGAAAGGATGGTGTTGCAACCGGT

Motif CTYCGTTCYSTGW

StartP-valueSite
5612.17e-07CCCCCCACCCCTTCGTTTCGTGTGGAGACCGTG
8153.84e-07GTCAACGATACTTCATTCCGTGACCCCTGACTG
3625.13e-07GTATTATGCTCTTCGTGCTCTGTATATTCTCAT
3417.60e-07CGCGGGTGTACTCCGTACTCTGTATTATGCTCT
8401.01e-06CCTGACTGGCCTCGGTTCCGTGACGGTCGAAAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010271 100.0 963 0 0 1 963 1 963 0.0 1779
aORI10010144 97.297 37 1 0 884 920 135 99 1.62e-11 64