RefSeq NZ_CP016804.1
DoriC accession number aORI10010309
OriC length 874 nt
OriC AT content 0.5378
The location of oriC region 2085533..460 nt
Browse in NCBI
OriC map
OriC sequences
TATGACCCACCTTGTGCGTCCCGGGGCTTGAAATCTCCGGACACGTCTACCCGTGCAGGCTGTAACGCCTTAAGTCTACAGGCAGAGCGGGCGACTGGTCCGGATCAGCAGTCCGCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCCGAGAAACAGCTGCGATTGTTTTCGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGAGTGTTCAGGACAGCACCCCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGCGTGGTGACGGGTTCAGAAACAGGATTCTTTTCTTAGATAACTTAGTTTATCAGTAAACGAGAATAGTATAGGCTGTTTTCTTTACTGGTTTACGGATACTGTTTTCACATCACCACCATAAATCTTCCCTAGTTCAGTAGCGGGGGACACTCACCCTGTTTCGTCGCTCCACACGAAACGAAGGGGTGGGGGGCTAGGGAGAAATCGCGCCCGATCCCAGTCGTTAAGCCCTCCATATCCTGAAAATATTGTTTTTGCAACTAATCTGCTGTCGAACAATCCGTTTCACCGCCCGCTCAGTCGTCGGTAAACCCGATCGGTTTCGCTCCCGTTCTGATCCGGTGGACCGATACCTTTTTGTCCGTCCCAGATCCGTGATTTCATCTGCATCAACTGGACGGGGAGGTACCTGGTGTGGCCCCTCTAATTGCCCGGAGCGGGGCGCTGCAATGCGTTTCCACCCGGTATCCTCCGCTGTCCCACTCGAACCGGGGGACATGACAC
TATGACCCACCTTGTGCGTCCCGGGGCTTGAAATCTCCGGACACGTCTACCCGTGCAGGCTGTAACGCCTTAAGTCTACAGGCAGAGCGGGCGACTGGTCCGGATCAGCAGTCCGCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCCGAGAAACAGCTGCGATTGTTTTCGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGAGTGTTCAGGACAGCACCCCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGCGTGGTGACGGGTTCAGAAACAGGATTCTTTTCTTAGATAACTTAGTTTATCAGTAAACGAGAATAGTATAGGCTGTTTTCTTTACTGGTTTACGGATACTGTTTTCACATCACCACCATAAATCTTCCCTAGTTCAGTAGCGGGGGACACTCACCCTGTTTCGTCGCTCCACACGAAACGAAGGGGTGGGGGGCTAGGGAGAAATCGCGCCCGATCCCAGTCGTTAAGCCCTCCATATCCTGAAAATATTGTTTTTGCAACTAATCTGCTGTCGAACAATCCGTTTCACCGCCCGCTCAGTCGTCGGTAAACCCGATCGGTTTCGCTCCCGTTCTGATCCGGTGGACCGATACCTTTTTGTCCGTCCCAGATCCGTGATTTCATCTGCATCAACTGGACGGGGAGGTACCTGGTGTGGCCCCTCTAATTGCCCGGAGCGGGGCGCTGCAATGCGTTTCCACCCGGTATCCTCCGCTGTCCCACTCGAACCGGGGGACATGACAC
TATGACCCACCTTGTGCGTCCCGGGGCTTGAAATCTCCGGACACGTCTACCCGTGCAGGCTGTAACGCCTTAAGTCTACAGGCAGAGCGGGCGACTGGTCCGGATCAGCAGTCCGCACCAAGCAGTTCCAGTTGAAACAGAGCGGTTGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAGGCATCGCTTCCGAGAAACAGCTGCGATTGTTTTCGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGTGACTAGATTCCGTGATTCAGTTATCGCTCCAGTAACATATCGAAAGTAAGAGTGTTCAGGACAGCACCCCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGCGTGGTGACGGGTTCAGAAACAGGATTCTTTTCTTAGATAACTTAGTTTATCAGTAAACGAGAATAGTATAGGCTGTTTTCTTTACTGGTTTACGGATACTGTTTTCACATCACCACCATAAATCTTCCCTAGTTCAGTAGCGGGGGACACTCACCCTGTTTCGTCGCTCCACACGAAACGAAGGGGTGGGGGGCTAGGGAGAAATCGCGCCCGATCCCAGTCGTTAAGCCCTCCATATCCTGAAAATATTGTTTTTGCAACTAATCTGCTGTCGAACAATCCGTTTCACCGCCCGCTCAGTCGTCGGTAAACCCGATCGGTTTCGCTCCCGTTCTGATCCGGTGGACCGATACCTTTTTGTCCGTCCCAGATCCGTGATTTCATCTGCATCAACTGGACGGGGAGGTACCTGGTGTGGCCCCTCTAATTGCCCGGAGCGGGGCGCTGCAATGCGTTTCCACCCGGTATCCTCCGCTGTCCCACTCGAACCGGGGGACATGACAC
ORB     AT-rich region
The information of repeat sequences

Motif GAAACAG

StartP-valueSite
3864.02e-05GACGGGTTCAGAAACAGGATTCTTTTC
2014.02e-05TCGCTTCCGAGAAACAGCTGCGATTGT
1344.02e-05AGTTCCAGTTGAAACAGAGCGGTTGGG
3637.34e-05GTGGAGCGCGAAAACAGCGTGGTGACG
1811.25e-04TGGAACGCGGGCAACAGGCATCGCTTC

Motif AYTGTTTT

StartP-valueSite
6181.27e-05TCCTGAAAATATTGTTTTTGCAACTAAT
2131.27e-05AACAGCTGCGATTGTTTTCGGTGAACCT
4682.70e-05GTTTACGGATACTGTTTTCACATCACCA
3945.39e-05CAGAAACAGGATTCTTTTCTTAGATAAC
4546.90e-05TGTTTTCTTTACTGGTTTACGGATACTG

Motif CCSBTCDDWTCGNBTGGAGCG

StartP-valueSite
3402.02e-09CCTCCCCCACCCCTTTGTTTCGTGTGGAGCGCGAAAACAGC
6996.11e-09GGTTTCGCTCCCGTTCTGATCCGGTGGACCGATACCTTTTT
1578.94e-09TGGGACCGCCCCGGTGATTTCGACTGGAACGCGGGCAACAG
2312.21e-08CGGTGAACCTCCGGCCGAATCGGTTGGAGTTGAGACTGTGT
7892.55e-08CCTGGTGTGGCCCCTCTAATTGCCCGGAGCGGGGCGCTGCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010309 100.0 874 0 0 1 874 1 874 0.0 1615
aORI10010308 94.616 873 44 3 1 872 1 871 0.0 1349