Basic Information

Assembly acc GCF_040970235.1
Acc NZ_CP162917.1
OriID ORI97274077
Organism Mycobacterium intracellulare
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5743925 nt
Chromosome GC content 67.78%
Indicator genes
  • dnaN      212926... 214125nt
  • dnaA      214660... 216195nt
  • rpmH      216798... 216941nt
  • hemB      941159... 942148nt
  • hemE      2027857... 2028930nt
OriC location
  • 214125 ... 214659 nt
OriC Length
  • 534 nt
OriC AT Content
  • 0.39

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207490 NZ_AP024248.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
2 ORI97207492 NZ_AP024250.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
3 ORI97207516 NZ_AP024266.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
4 ORI97255048 NZ_CP085945.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
5 ORI97257005 NZ_CP076379.2 Mycobacterium intracellulare 100.00% 100.00% Not linked
6 ORI97268956 NZ_CP142025.1 Mycobacterium sp. 5-140-3-2 100.00% 100.00% Not linked
7 ORI97269052 NZ_CP142360.1 Mycobacterium sp. 3-98 100.00% 100.00% Not linked
8 ORI97278251 NZ_CP118870.1 Mycobacterium paraintracellulare 100.00% 100.00% Not linked
9 ORI97207478 NZ_AP024240.1 Mycobacterium paraintracellulare 99.80% 100.00% Not linked
10 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 99.80% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP162917.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
214660 216195 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnanAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaa
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
dnaNAGCGTCCCTTCACCTTCAGCGTTTTCGAATCCATTGTGGCTAGCCTCCCCCCGCTAGCACGGGGCTCCGCCACGAGCGCCGGCGACGCAACGCGCCGACGACGACCGTAACGGCAGTCGAAGAACAACCGTAGATCCTCCGGGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAAACGATCTGACGACGGACTCGGCGAGGGGTGTGCACCGAACGTCCCCAGGCCTGTATTTCCAAGAAGAACCGATGTAGAGATCTCAGTAACAGTATTAAGGCCTGTGCATTCTGGGGACAGCGTCGCCCCGGCCCAGCTAGCGCGACGATCGGGATGTGGATCGTCGCGGTGGCGCCTGTGAGTCAGGTGTTGGTCCGGTGGGGACGAACGACAAGTGTGCACGGAACGCCCGGTACTGCACCGCAGTTTGAATGCTGTGTGCACAGGGCTGCGCACATGCCCTGGGTGTTGCGGATGTGACGGACGCGCGAGAAGTTTCTCGAAAAATTTGCGCGCAGGGGCGCCGAAACCGGGGATdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 82.92% 527 72 15 1 517 569 51 0.0 459.0
ORI10040011 82.69% 520 72 15 1 510 569 58 0.0 446.0
Found 2 BLAST matches
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