Basic Information

Assembly acc GCF_016756035.1
Acc NZ_AP024240.1
OriID ORI97207478
Organism Mycobacterium paraintracellulare
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium paraintracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5739349 nt
Chromosome GC content 67.98%
Indicator genes
  • dnaA      101... 1636nt
  • dnaN      2171... 3370nt
  • hemE      3961591... 3962664nt
  • hemB      5090951... 5091940nt
  • rpmH      5738704... 5738847nt
OriC location
  • 1637 ... 2170 nt
OriC Length
  • 534 nt
OriC AT Content
  • 0.3876

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207490 NZ_AP024248.1 Mycobacterium intracellulare 99.80% 100.00% Not linked
2 ORI97207492 NZ_AP024250.1 Mycobacterium intracellulare 99.80% 100.00% Not linked
3 ORI97207516 NZ_AP024266.1 Mycobacterium intracellulare 99.80% 100.00% Not linked
4 ORI97255048 NZ_CP085945.1 Mycobacterium intracellulare 99.80% 100.00% Not linked
5 ORI97257005 NZ_CP076379.2 Mycobacterium intracellulare 99.80% 100.00% Not linked
6 ORI97268956 NZ_CP142025.1 Mycobacterium sp. 5-140-3-2 99.80% 100.00% Not linked
7 ORI97269052 NZ_CP142360.1 Mycobacterium sp. 3-98 99.80% 100.00% Not linked
8 ORI97274077 NZ_CP162917.1 Mycobacterium intracellulare 99.80% 100.00% Not linked
9 ORI97278251 NZ_CP118870.1 Mycobacterium paraintracellulare 99.80% 100.00% Not linked
10 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 99.60% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_AP024240.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
101 1636 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaaATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnan
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCCGGTTTCGGCGCCCCTGCGCGCAAATTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACTTGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGTCCGTCGTCAGATCGTTTTGTGGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 82.73% 527 73 15 18 534 51 569 0.0 453.0
ORI10040011 82.50% 520 73 15 25 534 58 569 0.0 440.0
Found 2 BLAST matches
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