Basic Information

Assembly acc GCF_025263485.1
Acc NZ_CP079863.1
OriID ORI97259943
Organism Mycobacterium sp. SMC-2
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium sp. SMC-2
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5978569 nt
Chromosome GC content 67.59%
Indicator genes
  • dnaN      742788... 743987nt
  • dnaA      744522... 746054nt
  • rpmH      746652... 746795nt
  • hemB      1453690... 1454673nt
  • hemE      2693034... 2694083nt
OriC location
  • 743987 ... 744521 nt
OriC Length
  • 534 nt
OriC AT Content
  • 0.4082

Comparative Sequence Support

Recurrence category Multi-accession
Sequence cluster BC-OH001782
Cluster members 4
Distinct accessions 4
Species / genera 4 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97275272 NZ_CP169059.1 Mycobacterium hainanense 83.30% 100.00% Not linked
2 ORI97020598 NZ_AP022582.1 Mycobacterium seoulense 82.70% 94.00% Not linked
3 ORI97034092 NZ_AP022619.1 Mycobacterium paraseoulense 82.00% 94.40% Not linked
4 ORI97207418 NZ_AP022597.1 Mycobacterium paraintracellulare 76.00% 93.40% Not linked
5 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 76.00% 93.40% Not linked
6 ORI97207482 NZ_AP024243.1 Mycobacterium paraintracellulare 76.00% 93.40% Not linked
7 ORI97207484 NZ_AP024244.1 Mycobacterium intracellulare 76.00% 93.40% Not linked
8 ORI97207490 NZ_AP024248.1 Mycobacterium intracellulare 76.00% 93.40% Not linked
9 ORI97207492 NZ_AP024250.1 Mycobacterium intracellulare 76.00% 93.40% Not linked
10 ORI97207494 NZ_AP024251.1 Mycobacterium paraintracellulare 76.00% 93.40% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP079863.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
744522 746054 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnanAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaa
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
dnaNAGCGTCCCTTCACCTACCGAGCGTTTGAAAGTCCAGTGGCTAGCCTCGCCCGCTAGCACGGGCTCCGCTACGAACGCCACTGACACGCAATGCCAACGACGAACGCAACGGCAGTCGAACAACAACCGTAGATCGTCCGAGGCCATCTTGAAAGCTAATCGCGAAGGCCGACAAGGCTCGCTATCGGCGGATCCGTGCGCGTGTTCAGTTCGGTGTCCCCAGCGCTGTACTTCAAAGAAGAAATGACGAAGAGATCTAAGTATTAGTAGTAAGGGCTGTGCATTCTGGGGAAGCCGCGGTCCGGCGCAGCTAGGACGGGCGTGGGGCTGTGGATGACGCCGTGCATAACTGTGAATCGGATGTTGGGCCGTTGGGGAGCATGGGCGGCTGTGTACGTATGGCCCGCTTACTACACGGCTGTTTGATGGTGTTGTGCACAGCGCCGCGCACAAGGCGTGGGTGTGGCGGGTGTGACAGGCGTGCGAGAAGTTTTTTGAAATTGATCTGGCGCCGTGCGCTCAGAGCAGGCGGGAGdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI94040331 77.10% 131 21 9 36 160 494 367 0.0 67.6
Found 1 BLAST matches
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