Basic Information

Assembly acc GCF_000321395.1
Acc NC_019896.1
OriID ORI97227894
Organism Bacillus subtilis subsp. subtilis str. BSP1
Topology Circular
Lineage Bacteria ; Bacillati ; Bacillota ; Bacilli ; Caryophanales ; Bacillaceae ; Bacillus ; Bacillus subtilis
Assembly Level Complete
Literature linkage Not linked
Chromosome size 4043754 nt
Chromosome GC content 43.87%
Indicator genes
  • rpmH      218... 352nt
  • gidA      4118... 6004nt
  • hemB      1351647... 1352621nt
  • hemE      2988249... 2989310nt
  • dnaN      4040681... 4041817nt
  • dnaA      4042006... 4043346nt
OriC location
  • 4041818 ... 4042005 nt
OriC Length
  • 188 nt
OriC AT Content
  • 0.6277

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000057
Cluster members 193
Distinct accessions 193
Species / genera 3 / 1
Literature-linked members 2

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI10010005 NC_000964.2 Bacillus subtilis subsp. subtilis str. 168 100.00% 100.00% Linked
2 ORI94010806 NC_014976.1 Bacillus subtilis BSn5 100.00% 100.00% Not linked
3 ORI96010270 NC_018520.1 Bacillus subtilis QB928 100.00% 100.00% Not linked
4 ORI97227896 NC_020507.1 Bacillus subtilis subsp. subtilis 6051-HGW 100.00% 100.00% Not linked
5 ORI97227923 NC_022898.1 Bacillus subtilis PY79 100.00% 100.00% Not linked
6 ORI97227925 NZ_AP012496.1 Bacillus subtilis BEST7003 100.00% 100.00% Not linked
7 ORI97227976 NZ_AP019714.1 Bacillus subtilis subsp. subtilis 100.00% 100.00% Not linked
8 ORI97227996 NZ_AP024621.1 Bacillus subtilis 100.00% 100.00% Not linked
9 ORI97227997 NZ_AP024622.1 Bacillus subtilis 100.00% 100.00% Not linked
10 ORI97227998 NZ_AP024623.1 Bacillus subtilis 100.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NC_019896.1
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Replication Initiation Protein

Replication initiator protein not detected in sequence

OriC Visualization

OriC map
OriC sequences
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnanTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaa
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
dnaNTTTTATCCTCCTAACGGATAATGTATTAATATATATATTTATAAAAAATAGTAGAAGTAATAGTAGGGCCTGTGGATTTGTGGATAAGTTGTGAAAAAGACAGGAAACACAGCCTATCCACATGTGGACAGACTGTGTATGACTTCCGAAAAGTTATTCACACTTTCCCCGATTGATCCCCGGTCCTGdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI96010270 100.00% 188 0 0 1 188 188 1 0.0 348.0
ORI94010806 100.00% 188 0 0 1 188 188 1 0.0 348.0
ORI10010005 100.00% 188 0 0 1 188 188 1 0.0 348.0
ORI96010026 99.47% 188 1 0 1 188 188 1 0.0 342.0
ORI96010195 97.90% 190 2 1 1 188 190 1 0.0 327.0
ORI96010024 98.40% 188 0 1 1 188 185 1 0.0 327.0
ORI94010733 97.87% 188 3 1 1 188 187 1 0.0 324.0
ORI95010927 97.35% 189 4 1 1 188 189 1 0.0 320.0
ORI94010764 91.94% 186 8 3 2 187 180 2 0.0 254.0
ORI96010022 92.14% 178 10 3 2 179 184 11 0.0 248.0
ORI96010020 92.14% 178 10 3 2 179 184 11 0.0 248.0
ORI96010018 92.14% 178 10 3 2 179 184 11 0.0 248.0
ORI94010747 92.14% 178 10 3 2 179 184 11 0.0 248.0
ORI96010218 91.57% 178 10 4 2 179 183 11 0.0 241.0
ORI96010003 91.57% 178 10 4 2 179 183 11 0.0 241.0
ORI95010969 91.57% 178 10 4 2 179 183 11 0.0 241.0
ORI96010361 91.01% 178 11 4 2 179 183 11 0.0 235.0
ORI10010123 84.71% 170 14 9 5 169 172 10 0.0 159.0
ORI10010119 84.71% 170 14 9 5 169 172 10 0.0 159.0
ORI93010666 81.36% 118 11 9 24 139 151 43 0.0 86.1
ORI93010662 80.51% 118 11 9 24 139 150 43 0.0 80.5
ORI96010011 79.66% 118 12 9 24 139 37 144 0.0 75.0
Found 22 BLAST matches
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