Basic Information

Assembly acc GCF_000009045.1
Acc NC_000964.2
OriID ORI10010005
Organism Bacillus subtilis subsp. subtilis str. 168
Topology Circular
Lineage Bacteria ; Bacillati ; Bacillota ; Bacilli ; Caryophanales ; Bacillaceae ; Bacillus ; Bacillus subtilis
Assembly Level Complete
Literature linkage Linked
Reported experimental region 4214414...1938 nt
Source accession: NC_000964.3
Reference links
A Bacillus subtilis gene-encoding protein homologous to eukaryotic SMC motor protein is necessary for chromosome partition.
Moriya S, Tsujikawa E, Hassan AK et al. Mol Microbiol (1998)
PubMed: 9701812 DOI
Chromosome size 4214630 nt
Chromosome GC content 43.52%
Indicator genes
  • dnaA      410... 1750nt
  • dnaN      1939... 3075nt
  • hemE      1085422... 1086483nt
  • hemB      2873267... 2874241nt
  • gidA      4208627... 4210513nt
  • rpmH      4214279... 4214413nt
OriC location
  • 1751 ... 1938 nt
OriC Length
  • 188 nt
OriC AT Content
  • 0.6277

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000057
Cluster members 193
Distinct accessions 193
Species / genera 3 / 1
Literature-linked members 2

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI94010806 NC_014976.1 Bacillus subtilis BSn5 100.00% 100.00% Not linked
2 ORI96010270 NC_018520.1 Bacillus subtilis QB928 100.00% 100.00% Not linked
3 ORI97227894 NC_019896.1 Bacillus subtilis subsp. subtilis str. BSP1 100.00% 100.00% Not linked
4 ORI97227896 NC_020507.1 Bacillus subtilis subsp. subtilis 6051-HGW 100.00% 100.00% Not linked
5 ORI97227923 NC_022898.1 Bacillus subtilis PY79 100.00% 100.00% Not linked
6 ORI97227925 NZ_AP012496.1 Bacillus subtilis BEST7003 100.00% 100.00% Not linked
7 ORI97227976 NZ_AP019714.1 Bacillus subtilis subsp. subtilis 100.00% 100.00% Not linked
8 ORI97227996 NZ_AP024621.1 Bacillus subtilis 100.00% 100.00% Not linked
9 ORI97227997 NZ_AP024622.1 Bacillus subtilis 100.00% 100.00% Not linked
10 ORI97227998 NZ_AP024623.1 Bacillus subtilis 100.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NC_000964.2
Open full view

Replication Initiation Protein

Replication initiator protein not detected in sequence

OriC Visualization

OriC map
OriC sequences
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
dnaACAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCTGTCTTTTTCACAACTTATCCACAAATCCACAGGCCCTACTATTACTTCTACTATTTTTTATAAATATATATATTAATACATTATCCGTTAGGAGGATAAAAdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI96010270 100.00% 188 0 0 1 188 1 188 0.0 348.0
ORI94010806 100.00% 188 0 0 1 188 1 188 0.0 348.0
ORI10010005 100.00% 188 0 0 1 188 1 188 0.0 348.0
ORI96010026 99.47% 188 1 0 1 188 1 188 0.0 342.0
ORI96010195 97.90% 190 2 1 1 188 1 190 0.0 327.0
ORI96010024 98.40% 188 0 1 1 188 1 185 0.0 327.0
ORI94010733 97.87% 188 3 1 1 188 1 187 0.0 324.0
ORI95010927 97.35% 189 4 1 1 188 1 189 0.0 320.0
ORI94010764 91.94% 186 8 3 2 187 2 180 0.0 254.0
ORI96010022 92.14% 178 10 3 10 187 11 184 0.0 248.0
ORI96010020 92.14% 178 10 3 10 187 11 184 0.0 248.0
ORI96010018 92.14% 178 10 3 10 187 11 184 0.0 248.0
ORI94010747 92.14% 178 10 3 10 187 11 184 0.0 248.0
ORI96010218 91.57% 178 10 4 10 187 11 183 0.0 241.0
ORI96010003 91.57% 178 10 4 10 187 11 183 0.0 241.0
ORI95010969 91.57% 178 10 4 10 187 11 183 0.0 241.0
ORI96010361 91.01% 178 11 4 10 187 11 183 0.0 235.0
ORI10010123 84.71% 170 14 9 20 184 10 172 0.0 159.0
ORI10010119 84.71% 170 14 9 20 184 10 172 0.0 159.0
ORI93010666 81.36% 118 11 9 50 165 43 151 0.0 86.1
ORI93010662 80.51% 118 11 9 50 165 43 150 0.0 80.5
Found 21 BLAST matches
Return to browse page